Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AP004242.1-201ENST00000533701 349 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC006270.2-201ENST00000578523 652 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC067852.3-201ENST00000589177 561 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC069200.1-201ENST00000609511 323 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AP003400.6-201ENST00000624698 740 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC138915.3-201ENST00000562908 1389 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC091152.2-201ENST00000591628 2569 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AL645937.1-201ENST00000641739 1652 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC116096.1-201ENST00000566804 2314 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 SNORD56.3-201ENST00000363507 71 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 RNA5SP50-201ENST00000363731 107 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 RSL24D1P1-201ENST00000404972 493 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 RPL31P2-201ENST00000413849 377 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 HMGB3P23-201ENST00000414981 585 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 AL356968.1-201ENST00000416622 474 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL21A1Q96P44 FTH1P1-201ENST00000437933 532 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 ISCA1P2-201ENST00000438679 421 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC008264.1-201ENST00000447612 367 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 HMGN2P21-201ENST00000447764 270 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 MRPL35P4-201ENST00000453682 566 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC025518.1-201ENST00000479856 347 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 KCTD9P5-201ENST00000504141 1170 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 MTCO1P30-201ENST00000515244 580 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 SOD1P3-201ENST00000518682 454 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 OR4R3P-201ENST00000525084 838 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC139103.1-201ENST00000534696 1030 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL21A1Q96P44 ATP5F1P7-201ENST00000567330 760 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 AL450270.1-201ENST00000606160 391 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC099778.2-201ENST00000610904 211 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 AC121761.2-201ENST00000617300 689 ntBASIC3.18□□□□□ -1.9
COL21A1Q96P44 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL21A1Q96P44 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL21A1Q96P44 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.18□□□□□ -1.9
COL21A1Q96P44 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL21A1Q96P44 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL21A1Q96P44 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL21A1Q96P44 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL21A1Q96P44 MTCO1P6-201ENST00000481192 1384 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 RNU4-35P-201ENST00000362588 141 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC234772.1-201ENST00000377927 937 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AL583834.1-201ENST00000406943 343 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 RN7SKP111-201ENST00000410349 271 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC245052.5-201ENST00000416320 649 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 EI24P1-201ENST00000416584 867 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 RPS3AP12-201ENST00000443616 753 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AL590399.6-201ENST00000446396 307 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC233982.1-201ENST00000451247 436 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 OR52A4P-202ENST00000481634 799 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC005921.1-201ENST00000510589 286 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC090616.5-202ENST00000582111 297 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 VN1R88P-201ENST00000596787 292 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC091488.1-201ENST00000604239 660 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC018754.1-201ENST00000607486 925 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms