Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC025768.1-201ENST00000510057 267 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AP006245.1-201ENST00000522549 120 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 RN7SL339P-201ENST00000580597 296 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 BNIP3P38-201ENST00000601117 544 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC021851.1-201ENST00000608537 1082 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AC084757.4-201ENST00000616350 526 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 AL355365.1-201ENST00000616480 294 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 U6.105-201ENST00000637379 88 ntBASIC3.57□□□□□ -1.84
RPRD1AQ96P16 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPRD1AQ96P16 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 ELL2P4-201ENST00000446870 1376 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 PAICSP7-201ENST00000419829 962 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AL451062.2-201ENST00000427515 271 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AL159987.2-201ENST00000432754 307 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 PRDX3P3-201ENST00000447765 522 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC010468.1-201ENST00000461022 817 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC034236.1-201ENST00000469891 373 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AP000916.1-201ENST00000533869 835 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC010735.1-201ENST00000567305 1026 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 MIR5186-201ENST00000577504 120 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 MIR3690-201ENST00000580266 75 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC017100.2-201ENST00000584628 355 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC011492.1-201ENST00000600023 315 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC024220.1-201ENST00000603675 484 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 BNIP3P4-201ENST00000604946 565 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 AC245100.7-201ENST00000609678 442 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.56□□□□□ -1.84
RPRD1AQ96P16 MFSD8-233ENST00000641482 4860 ntBASIC3.56□□□□□ -1.84
RPRD1AQ96P16 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 RNU6-1151P-201ENST00000384684 107 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 RPS7P15-201ENST00000415804 584 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC244098.2-201ENST00000422068 99 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 MTND4P15-201ENST00000437913 1033 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 PTGES3P5-201ENST00000455109 434 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 BX248409.1-201ENST00000455497 255 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 RPS15AP1-201ENST00000457423 391 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 RPL21P10-201ENST00000463521 490 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 RPL21P104-201ENST00000464143 478 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 CYCSP20-201ENST00000473154 315 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 IGHV3-76-201ENST00000522465 295 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC095057.3-201ENST00000567102 1157 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC006557.5-201ENST00000603126 811 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC069200.1-201ENST00000609511 323 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC006023.2-201ENST00000609916 167 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AL445493.3-201ENST00000619568 477 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RPRD1AQ96P16 AC022149.2-201ENST00000621061 203 ntBASIC3.55□□□□□ -1.84
RPRD1AQ96P16 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms