Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC112206.3-201ENST00000514578 389 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 SUB1P1-201ENST00000524415 382 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC024224.1-201ENST00000538284 609 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC005668.1-201ENST00000571142 476 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC090615.1-201ENST00000577519 154 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 UBE2L4-201ENST00000587688 464 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC005191.1-201ENST00000603950 358 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AP001836.1-201ENST00000604675 523 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AL162730.1-201ENST00000605734 292 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AL122125.1-201ENST00000616999 600 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC009318.4-201ENST00000620496 486 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AC073869.8-201ENST00000641806 335 ntBASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD1Q96NR3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC009962.1-201ENST00000567327 3813 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 RNA5SP335-201ENST00000363817 110 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 SNORA70.6-201ENST00000383934 134 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 U3.20-201ENST00000390909 217 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 TXNP7-201ENST00000406296 293 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 RAB28P1-201ENST00000411517 641 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 MTND3P8-201ENST00000412909 339 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AL133482.1-201ENST00000415988 498 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 GNG5P5-201ENST00000420444 220 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 NCOR1P3-201ENST00000420479 303 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 PSMA6P3-201ENST00000428242 164 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 RPL12P17-201ENST00000432393 498 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 IFNA20P-201ENST00000436840 528 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 DDX3P2-201ENST00000446138 111 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 RPL7P52-201ENST00000449200 742 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AL513533.1-201ENST00000453728 415 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 RPL10P17-201ENST00000453852 316 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AL163973.1-201ENST00000484753 577 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC021146.1-201ENST00000511202 716 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC060771.1-201ENST00000582031 164 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AL133255.1-201ENST00000606374 441 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AL365204.3-201ENST00000612448 685 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 MIR6133-201ENST00000617057 108 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC002550.2-201ENST00000621246 394 ntBASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.1□□□□□ -1.59
PTCHD1Q96NR3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 MTND4P35-201ENST00000604257 1375 ntBASIC5.09□□□□□ -1.59
PTCHD1Q96NR3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 274.4 ms