Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP47Q96K76 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP47Q96K76 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 AC073464.3-201ENST00000422564 712 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 FTH1P1-201ENST00000437933 532 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 MTCYBP12-201ENST00000440559 1134 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 AC245517.2-201ENST00000442890 346 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.05□□□□□ -1.76
USP47Q96K76 RNU7-27P-201ENST00000459281 62 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 HIGD1AP13-201ENST00000509878 289 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 RNU6-1308P-201ENST00000516817 103 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.05□□□□□ -1.76
USP47Q96K76 AC104997.1-201ENST00000519761 717 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 HMGB3P26-201ENST00000560051 582 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 AL157394.1-201ENST00000562983 1224 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 CYCSP39-201ENST00000565821 309 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.05□□□□□ -1.76
USP47Q96K76 AP001542.1-201ENST00000591314 200 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP47Q96K76 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.05□□□□□ -1.76
USP47Q96K76 AL353743.4-201ENST00000422653 1547 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 FAM35BP-202ENST00000497389 3337 ntBASIC4.05□□□□□ -1.76
USP47Q96K76 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP47Q96K76 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP47Q96K76 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP47Q96K76 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP47Q96K76 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.04□□□□□ -1.76
USP47Q96K76 NPM1P24-201ENST00000428039 894 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 AC022018.1-201ENST00000430685 241 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 RPL32P28-201ENST00000443577 397 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 AL157827.1-201ENST00000447622 132 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.04□□□□□ -1.76
USP47Q96K76 AC106872.2-201ENST00000494303 480 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.04□□□□□ -1.76
USP47Q96K76 AC118282.1-201ENST00000506408 765 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.04□□□□□ -1.76
USP47Q96K76 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.04□□□□□ -1.76
USP47Q96K76 AC119751.1-201ENST00000513357 765 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 RNU6-491P-201ENST00000516099 110 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.04□□□□□ -1.76
USP47Q96K76 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.04□□□□□ -1.76
USP47Q96K76 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.04□□□□□ -1.76
USP47Q96K76 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.04□□□□□ -1.76
USP47Q96K76 AC022387.2-201ENST00000604050 448 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 AL139286.1-201ENST00000604465 483 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.04□□□□□ -1.76
USP47Q96K76 PLCE1P1-201ENST00000622094 305 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP47Q96K76 AL359715.4-201ENST00000606629 1436 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
USP47Q96K76 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP47Q96K76 AL136360.1-201ENST00000503377 1900 ntBASIC4.04□□□□□ -1.76
USP47Q96K76 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
USP47Q96K76 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
USP47Q96K76 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP47Q96K76 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.03□□□□□ -1.76
USP47Q96K76 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.03□□□□□ -1.76
USP47Q96K76 AL139413.1-201ENST00000421309 217 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.03□□□□□ -1.76
USP47Q96K76 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.03□□□□□ -1.76
USP47Q96K76 AC073069.1-201ENST00000428657 441 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.03□□□□□ -1.76
USP47Q96K76 TPTE2P1-204ENST00000435256 593 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.03□□□□□ -1.76
USP47Q96K76 AP004217.1-201ENST00000480579 346 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 OR52A4P-203ENST00000498233 1014 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 AC010306.1-201ENST00000523223 1117 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 AC091515.1-201ENST00000548110 679 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 ELOCP29-201ENST00000588193 334 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.03□□□□□ -1.76
USP47Q96K76 AC119674.1-220ENST00000641502 1048 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 AC007342.9-201ENST00000623877 1385 ntBASIC4.03□□□□□ -1.76
USP47Q96K76 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP47Q96K76 RNU6-851P-201ENST00000384565 107 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC105272.1-201ENST00000438604 198 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 RPL29P29-201ENST00000448725 423 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AL162388.1-201ENST00000450912 352 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 RNA5SP367-201ENST00000516557 118 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.02□□□□□ -1.77
USP47Q96K76 SMARCE1P4-201ENST00000523647 241 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC008083.2-201ENST00000546707 476 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC107016.2-201ENST00000547968 190 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP47Q96K76 AC104984.5-201ENST00000586878 94 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP47Q96K76 AC073111.2-201ENST00000605657 1075 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AL359535.1-201ENST00000612100 1087 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.02□□□□□ -1.77
USP47Q96K76 MIR6715A-201ENST00000615929 79 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.02□□□□□ -1.77
USP47Q96K76 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms