Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC091304.9-201ENST00000612091 226 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 EIF3FP1-201ENST00000613970 806 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC090510.2-201ENST00000617465 629 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC055839.1-201ENST00000634467 498 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 OR2L1P-202ENST00000641567 1023 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AL031119.1-201ENST00000404707 1879 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC006378.2-201ENST00000623178 2476 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ERCC4Q92889 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ERCC4Q92889 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ERCC4Q92889 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC131971.1-201ENST00000332881 1482 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 KPNA2P2-201ENST00000419546 1489 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.24□□□□□ -1.57
ERCC4Q92889 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ERCC4Q92889 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.24□□□□□ -1.57
ERCC4Q92889 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.24□□□□□ -1.57
ERCC4Q92889 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 U8.14-201ENST00000390843 143 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 RPS3AP23-201ENST00000401762 784 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 LAP3P1-201ENST00000403648 294 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 HDGFP1-201ENST00000405943 252 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 RN7SKP266-201ENST00000410232 287 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 VDAC1P9-201ENST00000412766 841 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 RSU1P3-201ENST00000412878 835 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 RPL37P1-201ENST00000432310 284 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 USP9YP12-201ENST00000450481 570 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 EIF4A1P11-201ENST00000451239 222 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 RN7SL41P-201ENST00000476144 297 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 RN7SL817P-201ENST00000480777 288 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 AC231760.1-201ENST00000498002 260 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ERCC4Q92889 MTND5P4-201ENST00000514978 288 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 RNU6-150P-201ENST00000516237 95 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.24□□□□□ -1.57
ERCC4Q92889 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AC022878.1-201ENST00000530684 149 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AC105129.1-201ENST00000560250 297 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.24□□□□□ -1.57
ERCC4Q92889 MIR3913-1-201ENST00000577744 102 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 MIR4307-201ENST00000582802 84 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AC103710.4-201ENST00000609301 899 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 AL359535.1-201ENST00000612100 1087 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 AC108479.2-201ENST00000617314 601 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC4Q92889 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC4Q92889 AL451142.2-201ENST00000429076 2090 ntBASIC5.24□□□□□ -1.57
ERCC4Q92889 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC4Q92889 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC4Q92889 AL356489.2-201ENST00000566968 3528 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.23□□□□□ -1.57
ERCC4Q92889 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ERCC4Q92889 RNU5E-4P-201ENST00000364931 120 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC4Q92889 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ERCC4Q92889 RPL23AP48-201ENST00000406913 488 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC4Q92889 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.23□□□□□ -1.57
ERCC4Q92889 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC4Q92889 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC4Q92889 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC4Q92889 PDSS1P1-201ENST00000422953 1114 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 BX890604.2-201ENST00000427883 474 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC4Q92889 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.23□□□□□ -1.57
ERCC4Q92889 PSMD10P3-201ENST00000437000 448 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC4Q92889 RPL12P3-201ENST00000440080 396 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC4Q92889 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.23□□□□□ -1.57
ERCC4Q92889 SLC25A18P1-201ENST00000449385 454 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC4Q92889 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.23□□□□□ -1.57
ERCC4Q92889 snoU109.1-201ENST00000459339 135 ntBASIC5.23□□□□□ -1.57
ERCC4Q92889 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.23□□□□□ -1.57
ERCC4Q92889 AC108941.1-201ENST00000502853 530 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms