Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 AL359893.1-201ENST00000447628 1580 ntBASIC4.39□□□□□ -1.71
HMGB4Q8WW32 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGB4Q8WW32 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 RPL23AP57-201ENST00000332361 466 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AL672167.1-206ENST00000356293 943 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 SNORA26.8-201ENST00000391306 124 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 RNA5SP36-201ENST00000410197 133 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 TPMTP2-201ENST00000414372 726 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 RPL7P2-201ENST00000427639 268 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AL117339.2-201ENST00000430475 180 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MED14P1-201ENST00000430517 648 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 BTF3P10-201ENST00000433415 495 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AL356276.2-201ENST00000435919 558 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MTND1P30-201ENST00000441241 901 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC114495.1-201ENST00000441274 436 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 TDGF1P1-201ENST00000445734 527 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 KATNBL1P6-201ENST00000453433 915 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 ZNF114P1-201ENST00000453500 292 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 RN7SL691P-201ENST00000494487 301 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 RPS27AP13-201ENST00000498403 237 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 RNA5SP519-201ENST00000516480 119 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 IGLVIV-53-201ENST00000520107 367 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MIR5186-201ENST00000577504 120 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MIR4458-201ENST00000578872 75 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 RPL23AP92-201ENST00000603609 255 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC025588.3-201ENST00000604182 274 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC092354.1-201ENST00000606057 376 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MIR6867-201ENST00000610636 67 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AC073114.1-201ENST00000612027 490 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AL356266.1-201ENST00000623311 483 ntBASIC4.38□□□□□ -1.71
HMGB4Q8WW32 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HMGB4Q8WW32 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 RNA5SP175-201ENST00000364275 119 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 SNORA70E-201ENST00000384492 135 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 RNU6-952P-201ENST00000391164 108 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 RPL31P1-201ENST00000398116 372 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 RPS3AP26-201ENST00000398259 784 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 RN7SKP182-201ENST00000410772 298 ntBASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB4Q8WW32 AC009237.10-201ENST00000414112 510 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms