Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 OR5B19P-201ENST00000531766 928 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC027544.3-201ENST00000535082 757 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC011611.1-201ENST00000552179 197 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 COX6CP3-201ENST00000580869 223 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC233702.9-201ENST00000581528 203 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 GLUD1P4-201ENST00000590914 418 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC007687.1-201ENST00000602704 304 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 uc_338.5-201ENST00000611839 155 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 THAP12P4-201ENST00000528321 2266 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHC3Q8NDX5 OR4G1P-203ENST00000641984 1631 ntBASIC5.56□□□□□ -1.52
PHC3Q8NDX5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC007938.2-201ENST00000604666 2634 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 SNORA63-201ENST00000363450 132 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 SNORA51.2-201ENST00000364595 132 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 RNU4-48P-201ENST00000365559 182 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 MIR130A-201ENST00000385274 89 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 RNU6-278P-201ENST00000390945 109 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 MIR1302-11-201ENST00000408051 138 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 MIR1302-9-201ENST00000408365 138 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 MIR1302-10-201ENST00000408734 138 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 MTCO3P46-201ENST00000425787 232 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 FTH1P1-201ENST00000437933 532 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 RAC1P7-201ENST00000445367 377 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 RPL7P51-201ENST00000490532 749 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 EIF4EP3-201ENST00000498782 656 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 HSPD1P15-201ENST00000505573 1122 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC105417.1-201ENST00000514691 285 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 OR4P1P-201ENST00000530808 1136 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC078814.3-201ENST00000553036 491 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC005668.1-201ENST00000571142 476 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 MIR1302-2-201ENST00000607096 138 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC245517.5-201ENST00000611529 162 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 AC135507.2-201ENST00000612443 309 ntBASIC5.55□□□□□ -1.52
PHC3Q8NDX5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHC3Q8NDX5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 AC093535.2-201ENST00000624769 2326 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 RNU4-79P-201ENST00000362764 141 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 RNU5E-8P-201ENST00000363502 116 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 SNORD37.1-201ENST00000390968 65 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 RNU6-332P-201ENST00000391193 108 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 NCOR1P3-201ENST00000420479 303 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 OR4F13P-201ENST00000428478 931 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 TMEM183AP1-205ENST00000432739 290 ntBASIC5.54□□□□□ -1.52
PHC3Q8NDX5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.54□□□□□ -1.52
PHC3Q8NDX5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms