Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 MTCYBP13-201ENST00000578634 1093 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RN7SL600P-201ENST00000581811 299 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC011471.1-201ENST00000585766 187 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AL136363.2-201ENST00000604173 851 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC005332.10-201ENST00000612725 619 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AL031985.3-201ENST00000565390 2449 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 RNU6-1119P-201ENST00000384349 108 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 RNU6-441P-201ENST00000384545 106 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 Y_RNA.517-201ENST00000384551 106 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 DEFB108C-201ENST00000400154 252 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AF274854.1-201ENST00000413236 615 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 E2F6P2-201ENST00000420708 748 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 PRELID3BP10-201ENST00000431957 584 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC239809.1-201ENST00000450470 217 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 MEMO1P3-201ENST00000459811 302 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC113430.1-201ENST00000506872 718 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 RNU6-150P-201ENST00000516237 95 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 RNU6-720P-201ENST00000516363 108 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 TRMT10BP1-201ENST00000519377 943 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 TRAV8-5-201ENST00000537369 341 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC006349.1-201ENST00000555526 235 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 PRPF19P1-201ENST00000584766 898 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC083760.1-201ENST00000589621 670 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 HSPE1P14-201ENST00000605812 302 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 RNU4-89P-201ENST00000607443 133 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AL121890.2-201ENST00000617644 465 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 AC018755.4-201ENST00000619715 454 ntBASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMC1BQ8NDV3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC073346.2-201ENST00000624724 2058 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 RNU1-130P-201ENST00000363930 160 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 Y_RNA.359-201ENST00000365498 102 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MIR649-201ENST00000384843 97 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL359643.1-201ENST00000404109 423 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL133384.1-201ENST00000412744 351 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 RPL17P12-201ENST00000413391 526 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 OR5BE1P-201ENST00000425977 939 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC096632.1-201ENST00000427395 310 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC023347.2-201ENST00000433994 462 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 RPL23AP16-201ENST00000441715 421 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL589765.3-201ENST00000446084 462 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL500522.2-201ENST00000448562 343 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 RN7SL517P-201ENST00000462240 305 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC053481.1-201ENST00000467217 306 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 RN7SL809P-201ENST00000482040 297 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 FAM172BP-201ENST00000487497 1089 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 RPL30P11-201ENST00000495304 339 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC025164.1-201ENST00000496249 478 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms