Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC005725.1-201ENST00000577346 2607 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-490P-201ENST00000362985 107 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RN7SKP187-201ENST00000365536 330 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 SNORD94-201ENST00000386037 137 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RN7SKP146-201ENST00000410242 334 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-1050P-201ENST00000410388 107 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RPS23P10-201ENST00000416185 486 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RPL18AP14-201ENST00000417685 526 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 GAPDHP33-201ENST00000443168 1013 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 GAPDHP20-201ENST00000444107 1007 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RPS18P1-201ENST00000447840 458 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 EIF4A1P11-201ENST00000451239 222 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC026801.2-201ENST00000515352 425 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 PTP4A1P6-201ENST00000531034 478 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AP002404.1-201ENST00000532005 451 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC140063.1-201ENST00000541343 259 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC007956.1-201ENST00000555623 542 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 RPL23AP84-201ENST00000571193 464 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AL669831.4-202ENST00000590817 238 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AL034351.1-201ENST00000605288 668 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC009229.3-201ENST00000608056 282 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 MIR6885-201ENST00000612241 66 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC007485.1-201ENST00000616755 206 ntBASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DEPDC4Q8N2C3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-715P-201ENST00000365204 103 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RNU1-115P-201ENST00000365329 160 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RNY1P14-201ENST00000384426 108 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 SNORD3H-201ENST00000384486 214 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 SPATA20P1-201ENST00000423089 438 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AL669831.1-202ENST00000428504 417 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 PSMA2P3-201ENST00000429685 675 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC016712.1-201ENST00000431088 378 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 TPT1P13-201ENST00000449760 499 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 FABP5P13-201ENST00000452144 328 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RPL12P25-201ENST00000455592 494 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RN7SL393P-201ENST00000463588 296 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC116655.1-201ENST00000508324 901 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 HIGD1AP3-201ENST00000515857 278 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RN7SKP183-201ENST00000517169 324 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC022360.1-201ENST00000521058 340 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC027026.1-201ENST00000532323 742 ntBASIC5.93□□□□□ -1.46
DEPDC4Q8N2C3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms