Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DBIP1-201ENST00000401435 260 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 C4BPAP2-201ENST00000428434 478 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AL645568.3-201ENST00000433683 316 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC007679.3-201ENST00000434035 414 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 RHOT1P3-201ENST00000436571 331 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 SNORD97-201ENST00000459187 142 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 RPL23AP55-201ENST00000498163 452 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 MTND6P8-201ENST00000503471 522 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 RBBP4P6-201ENST00000508098 202 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 ZNF519P4-201ENST00000514008 125 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 RNU6-1092P-201ENST00000516955 87 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AP005639.1-201ENST00000526939 192 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC006600.1-201ENST00000572529 153 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC008521.1-201ENST00000587471 187 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AC069234.4-201ENST00000621276 412 ntBASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCUBE3Q8IX30 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC092724.1-201ENST00000624623 3397 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 WBP11P1-201ENST00000562560 1931 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AP001541.1-201ENST00000623322 1904 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 Y_RNA.65-201ENST00000362846 100 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 RN7SKP115-201ENST00000363177 317 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 RNA5SP279-201ENST00000365513 117 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 RNU6-434P-201ENST00000384376 107 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 SNORA51.11-201ENST00000384442 131 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AL138885.1-201ENST00000405921 675 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AL158071.1-201ENST00000430315 461 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 RPS29P14-201ENST00000431518 171 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 MRPS21P3-201ENST00000436696 262 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 RANP2-201ENST00000456833 229 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 SNORD121B-201ENST00000458838 81 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC093767.1-201ENST00000504523 156 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 HMGN1P28-201ENST00000521340 364 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AL133153.1-201ENST00000557756 303 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AL138889.2-201ENST00000603883 242 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AL159153.1-201ENST00000619688 317 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC130650.2-201ENST00000618736 2403 ntBASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCUBE3Q8IX30 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
SCUBE3Q8IX30 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SCUBE3Q8IX30 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms