Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC006116.10-201ENST00000591836 581 ntBASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC005776.1-201ENST00000603164 290 ntBASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC026741.1-201ENST00000605892 482 ntBASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 MIR6810-201ENST00000622701 70 ntBASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC097372.4-201ENST00000625025 466 ntBASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.35□□□□□ -1.87
NUDCD3Q8IVD9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AC005183.1-201ENST00000603687 1979 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 RNU6-609P-201ENST00000365459 107 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 SNORD65C-201ENST00000390962 71 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 PPIAP31-201ENST00000405422 495 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 RPL23AP47-201ENST00000408017 460 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AC073264.1-201ENST00000411508 416 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AC010881.1-201ENST00000433830 235 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AC091390.1-201ENST00000433904 331 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 HSFY3P-201ENST00000444242 1191 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 GTF2IP12-201ENST00000456547 356 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AC087879.1-201ENST00000474343 374 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 PRELID3BP5-201ENST00000508612 460 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 RNU6-416P-201ENST00000516265 103 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 HIGD1AP6-201ENST00000521833 279 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 IGHV3-76-201ENST00000522465 295 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 MTCYBP41-201ENST00000528913 1123 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 UBE2NP1-201ENST00000545592 458 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 AC098483.2-201ENST00000603158 454 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 RNA5SP196-201ENST00000625967 102 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUDCD3Q8IVD9 ELL2P4-201ENST00000446870 1376 ntBASIC3.34□□□□□ -1.88
NUDCD3Q8IVD9 AC025263.3-201ENST00000622965 1396 ntBASIC3.34□□□□□ -1.88
NUDCD3Q8IVD9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.34□□□□□ -1.88
NUDCD3Q8IVD9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.34□□□□□ -1.88
NUDCD3Q8IVD9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 RNA5SP44-201ENST00000410446 133 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 RN7SKP263-201ENST00000411194 309 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC005517.2-201ENST00000424673 553 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 HMGB1P12-201ENST00000438594 598 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 GXYLT1P1-201ENST00000446657 490 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 NUTF2P7-201ENST00000453086 375 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 RPL32P14-201ENST00000463196 378 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC068587.1-201ENST00000483613 781 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 HMGB1P38-201ENST00000490557 577 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 HMGN1P11-201ENST00000508668 303 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 RNU6-488P-201ENST00000515918 99 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AP003049.1-201ENST00000529418 457 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 OR4T1P-201ENST00000554933 911 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC010591.1-201ENST00000603941 649 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 SNORA51-201ENST00000606420 132 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC090912.3-201ENST00000609775 533 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC106730.3-201ENST00000624568 641 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC068724.3-201ENST00000625906 87 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 SAGE4P-201ENST00000442271 3381 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AC073055.1-201ENST00000456901 1621 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AL645937.1-201ENST00000641739 1652 ntBASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NUDCD3Q8IVD9 AL672296.1-201ENST00000427780 2158 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms