Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 ARL2BPP5-201ENST00000523141 481 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 OR5M2P-201ENST00000529003 936 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC068587.4-201ENST00000533893 186 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC125611.2-201ENST00000551907 647 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AL110118.1-201ENST00000553543 400 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AL512360.1-201ENST00000555346 234 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 RN7SL652P-201ENST00000577769 300 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC090312.2-201ENST00000582687 378 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 MIR4307-201ENST00000582802 84 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 DHX9P1-201ENST00000436565 3076 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 Y_RNA.142-201ENST00000363491 102 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 RNU6-1122P-201ENST00000384449 107 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 U8.14-201ENST00000390843 143 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 RPS3AP36-201ENST00000398190 775 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AP000580.1-201ENST00000404439 358 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL031119.1-201ENST00000404707 1879 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL080315.1-201ENST00000406055 466 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 BX295541.1-201ENST00000417774 250 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 RBMY2KP-201ENST00000418221 992 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC092634.6-201ENST00000418558 192 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 PIGFP2-201ENST00000421400 651 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC079448.1-201ENST00000449377 373 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL590365.1-201ENST00000450788 243 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 NF1P3-201ENST00000457709 450 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC021205.1-201ENST00000468797 348 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC015724.1-201ENST00000478577 156 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC098583.1-201ENST00000480875 255 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC011005.3-201ENST00000491624 395 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AP003467.2-201ENST00000520175 319 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 IGKV2D-10-201ENST00000520194 281 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 RPL21P5-201ENST00000554662 472 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 RN7SL435P-201ENST00000584418 282 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC055876.5-201ENST00000605667 259 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC100827.5-201ENST00000615883 426 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 MIR8069-1-201ENST00000616627 86 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC018926.3-201ENST00000618841 406 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 MIR8069-2-201ENST00000621412 86 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AL359922.3-201ENST00000624779 1670 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 MIR3662-201ENST00000637030 95 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
VRK3Q8IV63 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 OR4G11P-202ENST00000642116 1414 ntBASIC4.59□□□□□ -1.67
VRK3Q8IV63 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK3Q8IV63 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VRK3Q8IV63 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
VRK3Q8IV63 AC107068.1-201ENST00000563286 4218 ntBASIC4.59□□□□□ -1.68
VRK3Q8IV63 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
VRK3Q8IV63 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms