Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC093311.1-201ENST00000506586 2021 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AL445437.1-201ENST00000623157 3087 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 YPEL5P1-201ENST00000419731 367 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC090543.2-201ENST00000483963 348 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 RFESD-208ENST00000513950 464 ntTSL 5 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 Y_RNA.540-201ENST00000384638 111 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 RPL23AP22-201ENST00000437556 453 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 OR5BN1P-201ENST00000532955 829 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 CUL1P1-201ENST00000509510 2425 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 OR6C64P-201ENST00000419708 825 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 FAR1P1-201ENST00000427163 934 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.87□□□□□ -2.11
CSMD3Q7Z407 AC092593.1-201ENST00000515413 1815 ntBASIC1.87□□□□□ -2.11
CSMD3Q7Z407 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 MIR30E-201ENST00000362104 92 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 SNORA36C-201ENST00000384289 132 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 BTF3P7-201ENST00000407097 488 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 RPS7P13-201ENST00000413955 498 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 RPS12P23-201ENST00000419579 400 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 RPL23AP15-201ENST00000450202 459 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 RNA5SP217-201ENST00000515959 91 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 BX679664.1-201ENST00000434429 253 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AL353997.5-201ENST00000618886 171 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC091903.1-201ENST00000624322 454 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 AC099654.11-201ENST00000638857 294 ntBASIC1.86□□□□□ -2.11
CSMD3Q7Z407 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 MIR423-201ENST00000362201 94 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 RPL23AP4-201ENST00000427757 463 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 ARL2BPP6-201ENST00000512757 439 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 SNORA31.1-201ENST00000515993 133 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 SNORA31.5-201ENST00000516190 133 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 RNU4-44P-201ENST00000363050 141 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 U3.6-201ENST00000363622 211 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 TGIF1P1-201ENST00000558095 802 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 NF1P10-201ENST00000613227 742 ntBASIC1.85□□□□□ -2.11
CSMD3Q7Z407 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms