Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AC130650.2-201ENST00000618736 2403 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 PHKBP1-201ENST00000450951 1951 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 Y_RNA.295-201ENST00000364918 102 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RN7SKP153-201ENST00000365026 316 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 MIR141-201ENST00000384975 95 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 MT-TL1-201ENST00000386347 75 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RPL23AP32-201ENST00000395315 459 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RNU2-50P-201ENST00000410494 143 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC009237.5-201ENST00000414271 501 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RPL7P57-201ENST00000423238 740 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 USP9YP9-201ENST00000429406 715 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 MTCO2P11-201ENST00000431069 680 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 BTF3P10-201ENST00000433415 495 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 PRPF38AP2-201ENST00000438179 851 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC112498.1-201ENST00000444401 332 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RPL23AP20-201ENST00000447965 421 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RPL10P17-201ENST00000453852 316 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RPL38P1-201ENST00000460914 211 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC022133.1-201ENST00000490961 571 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC069439.1-201ENST00000494739 167 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 RPS24P16-201ENST00000497294 392 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC097173.1-201ENST00000505862 819 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC093677.1-201ENST00000514414 678 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC022360.1-201ENST00000521058 340 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL512360.1-201ENST00000555346 234 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 MIR4504-201ENST00000577413 92 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC005730.3-201ENST00000583067 366 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL049634.3-201ENST00000604968 457 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AL161734.1-201ENST00000609720 557 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 BX664608.1-201ENST00000610519 487 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC091905.1-201ENST00000624400 311 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC010149.2-201ENST00000637608 315 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 CASC19-280ENST00000642102 1351 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 AC027228.2-201ENST00000567141 2154 ntBASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RUFY4Q6ZNE9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AL731532.2-201ENST00000623542 1953 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC104260.2-201ENST00000623551 3497 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC004817.4-201ENST00000602396 3625 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 CBX3P1-201ENST00000325243 554 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-343P-201ENST00000364709 104 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-1293P-201ENST00000384077 107 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-195P-201ENST00000411352 109 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 CALM1P1-201ENST00000442082 433 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 IGHV5-78-201ENST00000450948 295 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC009220.1-201ENST00000451614 275 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 MTND1P12-201ENST00000455231 147 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AP1S2P1-201ENST00000457344 379 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL738P-201ENST00000470264 297 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AP000852.1-201ENST00000472460 573 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC023194.1-201ENST00000493084 308 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC008897.1-201ENST00000494006 347 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 FTH1P24-201ENST00000503502 462 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms