Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 snoU109.6-201ENST00000516831 118 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 HMGB1P23-201ENST00000518743 568 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 OR5AK1P-201ENST00000524837 922 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC063950.1-201ENST00000552036 308 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 PSMB7P1-201ENST00000556349 514 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 BPTFP1-201ENST00000579209 492 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 MIR5096-201ENST00000583713 70 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC020914.6-201ENST00000594327 272 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL356218.2-201ENST00000605264 187 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 FAM27D1-201ENST00000612308 341 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL589743.7-201ENST00000612637 233 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 AC005332.5-201ENST00000591222 2919 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF549Q6P9A3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 PABPC1P9-201ENST00000426076 1612 ntBASIC4.15□□□□□ -1.74
ZNF549Q6P9A3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 SNORD74.4-201ENST00000364129 80 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC068287.1-201ENST00000430283 295 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 CACYBPP1-201ENST00000438592 684 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC122718.1-201ENST00000439448 744 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AL353748.1-201ENST00000440753 474 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 H2AFZP6-201ENST00000444403 394 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 TPT1P13-201ENST00000449760 499 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC003071.1-201ENST00000451219 789 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 MTCO3P11-201ENST00000455103 774 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 FAM133DP-201ENST00000464802 691 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 MTCO3P38-201ENST00000468910 766 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC109327.1-201ENST00000471666 403 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC006517.1-201ENST00000480485 328 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC138853.1-201ENST00000503549 823 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC093824.1-201ENST00000508796 343 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC093281.2-201ENST00000510153 597 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC092325.1-201ENST00000566449 554 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AL161729.3-201ENST00000603533 673 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC023813.4-201ENST00000607580 580 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AP004247.3-201ENST00000608682 624 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 AC097504.1-201ENST00000515103 2415 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 CASC19-284ENST00000642142 1868 ntBASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ZNF549Q6P9A3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 TEX21P-201ENST00000447107 1476 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 RNU6-433P-201ENST00000363216 104 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 RNA5SP509-201ENST00000364577 119 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 SNORA62.2-201ENST00000364672 152 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 SNORA56-201ENST00000383966 129 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 RNU6-1300P-201ENST00000391046 108 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 MTND4LP20-201ENST00000402379 270 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 RN7SKP222-201ENST00000410651 315 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms