Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC93Q567U6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC93Q567U6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC93Q567U6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC93Q567U6 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.2□□□□□ -1.58
CCDC93Q567U6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
CCDC93Q567U6 AC016588.2-201ENST00000632484 3021 ntBASIC5.2□□□□□ -1.58
CCDC93Q567U6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC93Q567U6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC93Q567U6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC93Q567U6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC93Q567U6 DBF4P1-201ENST00000412976 1892 ntBASIC5.2□□□□□ -1.58
CCDC93Q567U6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AL136964.1-201ENST00000622038 2990 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 RNU6-1066P-201ENST00000363573 105 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 SNORA74C-2-201ENST00000411179 201 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC244035.1-201ENST00000430042 390 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 RPL7P59-201ENST00000447700 943 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 RPL7P15-201ENST00000461190 712 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 RPL7P49-201ENST00000471402 708 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 NCOR1P1-202ENST00000486162 291 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC112198.1-201ENST00000505369 1220 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 HMGB3P13-201ENST00000511263 607 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 RNU6-885P-201ENST00000516607 104 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 PAICSP4-201ENST00000517543 1253 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 RFPL1S-203ENST00000539579 330 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC119751.7-201ENST00000600494 245 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AF131215.7-201ENST00000602443 707 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC008083.4-201ENST00000615076 444 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 AL390237.1-201ENST00000404226 1415 ntBASIC5.19□□□□□ -1.58
CCDC93Q567U6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC93Q567U6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC93Q567U6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC93Q567U6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC93Q567U6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC93Q567U6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC93Q567U6 RNU6-253P-201ENST00000384730 105 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AL121834.1-202ENST00000404494 277 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AL355379.1-201ENST00000405542 640 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AL133264.1-201ENST00000407157 562 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 RPL23AP47-201ENST00000408017 460 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 RNU4-6P-201ENST00000410804 122 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC093578.1-201ENST00000415219 368 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC008280.1-201ENST00000418851 412 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 SKP1P3-201ENST00000429280 487 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AL590103.1-201ENST00000434488 307 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 TAF9P1-201ENST00000445421 515 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 RPS27AP15-201ENST00000447672 466 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC93Q567U6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC93Q567U6 MTCO3P16-201ENST00000454456 754 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 TAF9P2-201ENST00000454958 515 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 RPL7P22-201ENST00000466005 733 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AF213884.1-201ENST00000488102 463 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC110792.1-201ENST00000491826 472 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 RPS6P4-201ENST00000494693 758 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 MTCO3P7-201ENST00000510008 774 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 RPL12P22-201ENST00000519073 490 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 HIGD1AP6-201ENST00000521833 279 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC93Q567U6 AP001189.2-201ENST00000527320 189 ntBASIC5.18□□□□□ -1.58
CCDC93Q567U6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms