Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 AL109659.3-201ENST00000624985 950 ntBASIC3.95□□□□□ -1.78
GABPAQ06546 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
GABPAQ06546 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GABPAQ06546 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
GABPAQ06546 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GABPAQ06546 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.95□□□□□ -1.78
GABPAQ06546 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
GABPAQ06546 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.94□□□□□ -1.78
GABPAQ06546 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GABPAQ06546 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GABPAQ06546 AC027287.1-201ENST00000553115 1453 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AL513302.2-201ENST00000562313 1842 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 RNU1-87P-201ENST00000363727 170 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
GABPAQ06546 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.94□□□□□ -1.78
GABPAQ06546 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.94□□□□□ -1.78
GABPAQ06546 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.94□□□□□ -1.78
GABPAQ06546 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.94□□□□□ -1.78
GABPAQ06546 UBE2V1P1-201ENST00000430836 445 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 RPS7P2-201ENST00000435134 607 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.94□□□□□ -1.78
GABPAQ06546 RNF2P1-201ENST00000442955 1010 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AC233982.1-201ENST00000451247 436 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.94□□□□□ -1.78
GABPAQ06546 RNU7-140P-201ENST00000459546 60 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AC015724.1-201ENST00000478577 156 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.94□□□□□ -1.78
GABPAQ06546 OR5H4P-201ENST00000510851 923 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 SNORA70.19-201ENST00000516717 90 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 RN7SKP96-201ENST00000516948 297 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.94□□□□□ -1.78
GABPAQ06546 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.94□□□□□ -1.78
GABPAQ06546 SERPINE4P-201ENST00000554978 281 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.94□□□□□ -1.78
GABPAQ06546 MIR4458-201ENST00000578872 75 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AC009948.4-201ENST00000604692 675 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AC099785.1-201ENST00000605697 437 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AC018645.2-201ENST00000609151 472 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.94□□□□□ -1.78
GABPAQ06546 AL512427.1-201ENST00000618593 349 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 AC126544.2-201ENST00000625174 749 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.94□□□□□ -1.78
GABPAQ06546 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.94□□□□□ -1.78
GABPAQ06546 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.94□□□□□ -1.78
GABPAQ06546 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
GABPAQ06546 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.94□□□□□ -1.78
GABPAQ06546 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
GABPAQ06546 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.94□□□□□ -1.78
GABPAQ06546 CEP170P1-201ENST00000502249 4587 ntBASIC3.94□□□□□ -1.78
GABPAQ06546 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
GABPAQ06546 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GABPAQ06546 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.93□□□□□ -1.78
GABPAQ06546 FAM35DP-201ENST00000323387 2712 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GABPAQ06546 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GABPAQ06546 SNORA38.1-201ENST00000364172 131 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 MIR3074-201ENST00000384885 81 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AL603865.2-201ENST00000401679 213 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 PRRC2CP1-201ENST00000404428 159 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.93□□□□□ -1.78
GABPAQ06546 AC092638.1-201ENST00000411966 1275 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 TAF13P2-201ENST00000416876 286 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AL512649.1-201ENST00000428997 581 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 AL592437.1-201ENST00000443781 492 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AL050341.1-201ENST00000447743 313 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.93□□□□□ -1.78
GABPAQ06546 AL645939.1-201ENST00000453429 797 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 ACTG1P13-201ENST00000486987 1043 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.93□□□□□ -1.78
GABPAQ06546 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 AC008885.2-201ENST00000509506 930 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 RNU6-416P-201ENST00000516265 103 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.93□□□□□ -1.78
GABPAQ06546 IGLVIV-53-201ENST00000520107 367 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 IGJP1-201ENST00000522682 475 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.93□□□□□ -1.78
GABPAQ06546 MTND5P21-201ENST00000531961 522 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.93□□□□□ -1.78
GABPAQ06546 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.93□□□□□ -1.78
GABPAQ06546 NIFKP8-201ENST00000560500 874 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC011492.1-201ENST00000600023 315 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 AC010680.3-201ENST00000604215 520 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC005000.2-201ENST00000605468 310 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC073657.2-201ENST00000605661 303 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.93□□□□□ -1.78
GABPAQ06546 AL133445.2-201ENST00000611191 527 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC004825.2-201ENST00000616634 455 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AC007275.1-201ENST00000621243 671 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 AL356321.1-201ENST00000621360 228 ntBASIC3.93□□□□□ -1.78
GABPAQ06546 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 AL121594.5-201ENST00000631724 573 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms