Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL355596.1-201ENST00000565399 3996 ntBASIC2.84□□□□□ -1.96
H3F3AP84243 MTCO1P8-201ENST00000416914 1523 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AL079305.1-201ENST00000623159 3008 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AC008264.2-201ENST00000610193 3731 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 SNORD56.3-201ENST00000363507 71 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
H3F3AP84243 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.83□□□□□ -1.96
H3F3AP84243 OR2B8P-201ENST00000432841 938 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AC091862.1-201ENST00000438016 1100 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 SSXP4-201ENST00000451349 245 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.83□□□□□ -1.96
H3F3AP84243 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.83□□□□□ -1.96
H3F3AP84243 AC034236.1-201ENST00000469891 373 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 ST13P14-201ENST00000474095 734 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
H3F3AP84243 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.83□□□□□ -1.96
H3F3AP84243 AP001207.2-201ENST00000519490 539 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.83□□□□□ -1.96
H3F3AP84243 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.83□□□□□ -1.96
H3F3AP84243 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.83□□□□□ -1.96
H3F3AP84243 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.83□□□□□ -1.96
H3F3AP84243 AC005951.1-201ENST00000576706 485 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.83□□□□□ -1.96
H3F3AP84243 CCDC58P3-201ENST00000590792 430 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AC100793.4-201ENST00000613683 429 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 AC018692.3-201ENST00000623929 123 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 FAM157B-203ENST00000639350 358 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 MAPK10-362ENST00000641864 4484 ntBASIC2.83□□□□□ -1.96
H3F3AP84243 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
H3F3AP84243 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
H3F3AP84243 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
H3F3AP84243 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
H3F3AP84243 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.83□□□□□ -1.96
H3F3AP84243 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
H3F3AP84243 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
H3F3AP84243 OR1S2-201ENST00000302592 978 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 SNORA51.4-201ENST00000364993 124 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.82□□□□□ -1.96
H3F3AP84243 EIF5P1-201ENST00000400019 1231 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AL138880.1-201ENST00000405824 642 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.82□□□□□ -1.96
H3F3AP84243 LINC01881-201ENST00000416103 412 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AC006960.1-201ENST00000419980 153 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 HMGN2P20-201ENST00000437531 273 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 ARL5AP3-201ENST00000439327 386 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.82□□□□□ -1.96
H3F3AP84243 TRIM60P18-201ENST00000441518 828 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 RPL7P52-201ENST00000449200 742 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AL513343.1-201ENST00000451818 792 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.82□□□□□ -1.96
H3F3AP84243 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.82□□□□□ -1.96
H3F3AP84243 AP003717.3-201ENST00000544832 1180 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 MIR4474-201ENST00000579189 78 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.82□□□□□ -1.96
H3F3AP84243 AC009303.3-201ENST00000591103 736 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 ZNF92P3-201ENST00000596594 954 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 BNIP3P33-201ENST00000598912 569 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.82□□□□□ -1.96
H3F3AP84243 AC007179.3-201ENST00000604976 235 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.82□□□□□ -1.96
H3F3AP84243 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
H3F3AP84243 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
H3F3AP84243 AC093908.1-201ENST00000623125 8092 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
H3F3AP84243 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.82□□□□□ -1.96
H3F3AP84243 MTCO1P24-201ENST00000515438 1558 ntBASIC2.82□□□□□ -1.96
H3F3AP84243 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.82□□□□□ -1.96
H3F3AP84243 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
H3F3AP84243 RNU6-335P-201ENST00000364563 113 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 RNU2-21P-201ENST00000410368 188 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 RNU2-71P-201ENST00000411395 189 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 BMS1P22-201ENST00000414726 313 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.81□□□□□ -1.96
H3F3AP84243 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.81□□□□□ -1.96
H3F3AP84243 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.81□□□□□ -1.96
H3F3AP84243 AC244505.4-201ENST00000434905 287 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.81□□□□□ -1.96
H3F3AP84243 RPS12P18-201ENST00000442381 270 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 SSXP5-201ENST00000443473 287 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.81□□□□□ -1.96
H3F3AP84243 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
H3F3AP84243 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.81□□□□□ -1.96
H3F3AP84243 RN7SL863P-201ENST00000462370 296 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 RPL21P104-201ENST00000464143 478 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.81□□□□□ -1.96
H3F3AP84243 HMGB1P38-201ENST00000490557 577 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.81□□□□□ -1.96
H3F3AP84243 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.81□□□□□ -1.96
H3F3AP84243 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.81□□□□□ -1.96
H3F3AP84243 POU5F1P7-201ENST00000508759 541 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.81□□□□□ -1.96
H3F3AP84243 RNA5SP217-201ENST00000515959 91 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 MTND2P26-201ENST00000528255 1029 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.81□□□□□ -1.96
H3F3AP84243 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.81□□□□□ -1.96
H3F3AP84243 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.81□□□□□ -1.96
H3F3AP84243 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.81□□□□□ -1.96
H3F3AP84243 AL159169.3-201ENST00000608871 561 ntBASIC2.81□□□□□ -1.96
H3F3AP84243 AL591516.1-201ENST00000611326 274 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms