Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC006504.1-201ENST00000562493 3666 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 AC068647.1-201ENST00000489539 2265 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNA1P78396 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.82□□□□□ -1.8
CCNA1P78396 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.82□□□□□ -1.8
CCNA1P78396 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCNA1P78396 AL121972.1-201ENST00000402023 252 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AL138885.1-201ENST00000405921 675 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.82□□□□□ -1.8
CCNA1P78396 AC005517.2-201ENST00000424673 553 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AL357552.1-201ENST00000445254 415 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNA1P78396 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNA1P78396 MTCO3P20-201ENST00000454926 688 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNA1P78396 AC006445.1-201ENST00000491925 405 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNA1P78396 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNA1P78396 SNORA70.19-201ENST00000516717 90 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNA1P78396 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNA1P78396 C1DP5-201ENST00000525775 383 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AC024224.1-201ENST00000538284 609 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AC006504.3-201ENST00000586818 523 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AC245128.3-201ENST00000594721 748 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNA1P78396 MIR6852-201ENST00000621699 66 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 AC026422.1-201ENST00000623961 452 ntBASIC3.82□□□□□ -1.8
CCNA1P78396 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
CCNA1P78396 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNA1P78396 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNA1P78396 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCNA1P78396 CR383658.2-201ENST00000547576 1525 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CCNA1P78396 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCNA1P78396 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCNA1P78396 RNU1-140P-201ENST00000365040 165 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 RNA5SP235-201ENST00000365411 114 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCNA1P78396 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNA1P78396 Z99755.1-201ENST00000414048 380 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 AC063979.1-201ENST00000415539 377 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNA1P78396 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 USP9YP31-201ENST00000431405 881 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNA1P78396 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNA1P78396 NANOGNBP1-201ENST00000448444 480 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 AL136097.1-201ENST00000456945 913 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 RPL23AP67-201ENST00000465341 474 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.81□□□□□ -1.8
CCNA1P78396 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.81□□□□□ -1.8
CCNA1P78396 RN7SKP116-201ENST00000516902 319 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 NARSP2-201ENST00000518524 679 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNA1P78396 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNA1P78396 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNA1P78396 AC010735.1-201ENST00000567305 1026 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNA1P78396 AC067852.3-201ENST00000589177 561 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNA1P78396 YWHAQP7-201ENST00000603536 658 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNA1P78396 AL157817.1-201ENST00000614264 790 ntBASIC3.81□□□□□ -1.8
CCNA1P78396 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNA1P78396 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.81□□□□□ -1.8
CCNA1P78396 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCNA1P78396 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.81□□□□□ -1.8
CCNA1P78396 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNA1P78396 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNA1P78396 AC118273.1-201ENST00000525324 3006 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNA1P78396 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNA1P78396 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCNA1P78396 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNA1P78396 TAF9BP2-201ENST00000400856 499 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AL138880.1-201ENST00000405824 642 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AC007899.1-201ENST00000412776 775 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNA1P78396 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AC074367.1-201ENST00000438685 1125 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AL662791.1-201ENST00000441992 928 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 HMGB1P38-201ENST00000490557 577 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNA1P78396 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNA1P78396 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNA1P78396 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNA1P78396 AC139103.1-201ENST00000534696 1030 ntBASIC3.8□□□□□ -1.8
CCNA1P78396 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CCNA1P78396 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNA1P78396 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNA1P78396 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms