Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC093840.1-201ENST00000511599 336 ntBASIC1.85□□□□□ -2.11
RPS28P62857 NREP-223ENST00000515855 801 ntTSL 4 BASIC1.85□□□□□ -2.11
RPS28P62857 SNORA70.16-201ENST00000516390 95 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AP002004.1-206ENST00000532441 876 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC1.85□□□□□ -2.11
RPS28P62857 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS28P62857 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS28P62857 MIR3154-201ENST00000577829 84 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC1.85□□□□□ -2.11
RPS28P62857 MIR5684-201ENST00000585074 65 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC1.85□□□□□ -2.11
RPS28P62857 AC069307.1-201ENST00000602820 447 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 AL353807.4-201ENST00000604995 257 ntBASIC1.85□□□□□ -2.11
RPS28P62857 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 AC073968.1-201ENST00000618594 637 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC090527.3-201ENST00000619041 548 ntBASIC1.85□□□□□ -2.11
RPS28P62857 MIR6500-201ENST00000622700 86 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AC007683.2-201ENST00000624681 714 ntBASIC1.85□□□□□ -2.11
RPS28P62857 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS28P62857 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 MFSD8-233ENST00000641482 4860 ntBASIC1.85□□□□□ -2.11
RPS28P62857 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS28P62857 AL049780.3-201ENST00000624612 1583 ntBASIC1.85□□□□□ -2.11
RPS28P62857 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPS28P62857 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC1.85□□□□□ -2.11
RPS28P62857 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.85□□□□□ -2.11
RPS28P62857 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPS28P62857 SDAD1P1-202ENST00000524156 2051 ntBASIC1.84□□□□□ -2.11
RPS28P62857 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.84□□□□□ -2.11
RPS28P62857 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPS28P62857 SNORA68.1-201ENST00000364537 132 ntBASIC1.84□□□□□ -2.11
RPS28P62857 MIR421-201ENST00000365696 85 ntBASIC1.84□□□□□ -2.11
RPS28P62857 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPS28P62857 RNU1-106P-201ENST00000384382 164 ntBASIC1.84□□□□□ -2.11
RPS28P62857 U3.20-201ENST00000390909 217 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.84□□□□□ -2.11
RPS28P62857 IL6-206ENST00000407492 926 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 MIR1266-201ENST00000408125 84 ntBASIC1.84□□□□□ -2.11
RPS28P62857 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPS28P62857 RNA5SP274-201ENST00000410484 108 ntBASIC1.84□□□□□ -2.11
RPS28P62857 UBTFL2-201ENST00000411859 1191 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC1.84□□□□□ -2.11
RPS28P62857 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 AL157831.1-201ENST00000426134 473 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC006455.6-201ENST00000426192 893 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.84□□□□□ -2.11
RPS28P62857 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 ARF4P4-201ENST00000439608 520 ntBASIC1.84□□□□□ -2.11
RPS28P62857 RRM2P4-201ENST00000441721 562 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AL356133.1-201ENST00000444762 372 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AL031659.1-201ENST00000447075 539 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPS28P62857 RN7SL83P-201ENST00000468131 297 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC023598.1-201ENST00000472521 361 ntBASIC1.84□□□□□ -2.11
RPS28P62857 RPL23AP45-201ENST00000476406 468 ntBASIC1.84□□□□□ -2.11
RPS28P62857 RN7SL502P-201ENST00000481857 290 ntBASIC1.84□□□□□ -2.11
RPS28P62857 RN7SL445P-201ENST00000495609 293 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 HMGB1P47-201ENST00000511281 589 ntBASIC1.84□□□□□ -2.11
RPS28P62857 RNU6-488P-201ENST00000515918 99 ntBASIC1.84□□□□□ -2.11
RPS28P62857 SNORA70.20-201ENST00000516848 126 ntBASIC1.84□□□□□ -2.11
RPS28P62857 RN7SKP272-201ENST00000516988 232 ntBASIC1.84□□□□□ -2.11
RPS28P62857 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC1.84□□□□□ -2.11
RPS28P62857 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC1.84□□□□□ -2.11
RPS28P62857 IGLVI-70-201ENST00000523272 390 ntBASIC1.84□□□□□ -2.11
RPS28P62857 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC1.84□□□□□ -2.11
RPS28P62857 IGKV2OR2-8-201ENST00000558710 300 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 AC023824.2-201ENST00000566185 400 ntBASIC1.84□□□□□ -2.11
RPS28P62857 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.84□□□□□ -2.11
RPS28P62857 RPL23AP84-201ENST00000571193 464 ntBASIC1.84□□□□□ -2.11
RPS28P62857 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS28P62857 MIR3616-201ENST00000584070 92 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC011891.2-201ENST00000604949 397 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC138473.1-201ENST00000605717 526 ntBASIC1.84□□□□□ -2.11
RPS28P62857 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC1.84□□□□□ -2.11
RPS28P62857 AL354760.1-201ENST00000608357 643 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AP002826.1-201ENST00000608835 315 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC112503.2-201ENST00000609005 552 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC009090.3-201ENST00000616553 565 ntBASIC1.84□□□□□ -2.11
RPS28P62857 AC018926.3-201ENST00000618841 406 ntBASIC1.84□□□□□ -2.11
RPS28P62857 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RPS28P62857 AC022336.2-201ENST00000568966 2538 ntBASIC1.84□□□□□ -2.12
RPS28P62857 PABPC1P6-201ENST00000445594 1829 ntBASIC1.84□□□□□ -2.12
RPS28P62857 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.84□□□□□ -2.12
RPS28P62857 AC111188.2-201ENST00000529697 1387 ntBASIC1.84□□□□□ -2.12
RPS28P62857 AL592148.3-201ENST00000608771 2646 ntBASIC1.84□□□□□ -2.12
RPS28P62857 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
RPS28P62857 AL137003.2-201ENST00000606924 2538 ntBASIC1.83□□□□□ -2.12
RPS28P62857 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
RPS28P62857 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 SNORA3A-201ENST00000364113 130 ntBASIC1.83□□□□□ -2.12
RPS28P62857 RNU6-670P-201ENST00000364312 104 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms