Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.33□□□□□ -1.88
LIM2P55344 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
LIM2P55344 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.32□□□□□ -1.88
LIM2P55344 AL365440.1-201ENST00000436135 2167 ntBASIC3.32□□□□□ -1.88
LIM2P55344 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.32□□□□□ -1.88
LIM2P55344 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIM2P55344 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIM2P55344 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
LIM2P55344 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIM2P55344 RNU6-839P-201ENST00000363347 108 ntBASIC3.32□□□□□ -1.88
LIM2P55344 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LIM2P55344 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.32□□□□□ -1.88
LIM2P55344 MIR200C-201ENST00000384980 68 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AL355143.1-201ENST00000407101 841 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AL139098.1-201ENST00000407291 389 ntBASIC3.32□□□□□ -1.88
LIM2P55344 MIR1250-201ENST00000408098 113 ntBASIC3.32□□□□□ -1.88
LIM2P55344 RNA5SP239-201ENST00000410218 129 ntBASIC3.32□□□□□ -1.88
LIM2P55344 RN7SKP177-201ENST00000410567 355 ntBASIC3.32□□□□□ -1.88
LIM2P55344 RNU6-575P-201ENST00000411326 105 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.32□□□□□ -1.88
LIM2P55344 AC009237.2-201ENST00000421358 284 ntBASIC3.32□□□□□ -1.88
LIM2P55344 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.32□□□□□ -1.88
LIM2P55344 RPS6P12-201ENST00000432491 726 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC073063.1-201ENST00000434352 607 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.32□□□□□ -1.88
LIM2P55344 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC091564.1-201ENST00000464563 479 ntBASIC3.32□□□□□ -1.88
LIM2P55344 SETP14-201ENST00000497538 873 ntBASIC3.32□□□□□ -1.88
LIM2P55344 ARL2BPP6-201ENST00000512757 439 ntBASIC3.32□□□□□ -1.88
LIM2P55344 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.32□□□□□ -1.88
LIM2P55344 RNU4-60P-201ENST00000517239 135 ntBASIC3.32□□□□□ -1.88
LIM2P55344 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
LIM2P55344 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIM2P55344 NDUFS5P6-201ENST00000529136 295 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC103843.2-201ENST00000530523 682 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.32□□□□□ -1.88
LIM2P55344 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.32□□□□□ -1.88
LIM2P55344 AC026333.2-201ENST00000542164 106 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.32□□□□□ -1.88
LIM2P55344 DUXAP6-201ENST00000553858 601 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.32□□□□□ -1.88
LIM2P55344 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.32□□□□□ -1.88
LIM2P55344 AC245389.1-201ENST00000605141 529 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AL365503.1-201ENST00000605247 905 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AL357559.1-201ENST00000622228 274 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC112200.1-201ENST00000625015 234 ntBASIC3.32□□□□□ -1.88
LIM2P55344 AC004808.1-201ENST00000627671 721 ntBASIC3.32□□□□□ -1.88
LIM2P55344 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.32□□□□□ -1.88
LIM2P55344 AC013437.2-201ENST00000639587 677 ntBASIC3.32□□□□□ -1.88
LIM2P55344 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LIM2P55344 MTCO1P14-201ENST00000441695 1559 ntBASIC3.32□□□□□ -1.88
LIM2P55344 MTND5P3-201ENST00000438536 1800 ntBASIC3.32□□□□□ -1.88
LIM2P55344 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.32□□□□□ -1.88
LIM2P55344 OTUD4P1-201ENST00000237841 3067 ntBASIC3.32□□□□□ -1.88
LIM2P55344 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIM2P55344 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.32□□□□□ -1.88
LIM2P55344 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIM2P55344 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.31□□□□□ -1.88
LIM2P55344 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LIM2P55344 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
LIM2P55344 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
LIM2P55344 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 DCAF13P1-201ENST00000495256 1330 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AL355578.1-201ENST00000607405 1328 ntBASIC3.31□□□□□ -1.88
LIM2P55344 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 HMGB1P5-201ENST00000255320 642 ntBASIC3.31□□□□□ -1.88
LIM2P55344 RNU6-115P-201ENST00000364310 107 ntBASIC3.31□□□□□ -1.88
LIM2P55344 MIR620-201ENST00000385232 95 ntBASIC3.31□□□□□ -1.88
LIM2P55344 RNU6-298P-201ENST00000390888 96 ntBASIC3.31□□□□□ -1.88
LIM2P55344 SSXP10-201ENST00000402595 565 ntBASIC3.31□□□□□ -1.88
LIM2P55344 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.31□□□□□ -1.88
LIM2P55344 CRYBB2P1-203ENST00000415709 538 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.31□□□□□ -1.88
LIM2P55344 AC068533.1-201ENST00000418542 415 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIM2P55344 RPP40P1-201ENST00000426762 456 ntBASIC3.31□□□□□ -1.88
LIM2P55344 PSMA2P3-201ENST00000429685 675 ntBASIC3.31□□□□□ -1.88
LIM2P55344 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.31□□□□□ -1.88
LIM2P55344 HSFY7P-201ENST00000432672 318 ntBASIC3.31□□□□□ -1.88
LIM2P55344 HSFY8P-201ENST00000437934 318 ntBASIC3.31□□□□□ -1.88
LIM2P55344 MTCYBP42-201ENST00000444653 1130 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.31□□□□□ -1.88
LIM2P55344 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
LIM2P55344 RPL7P59-201ENST00000447700 943 ntBASIC3.31□□□□□ -1.88
LIM2P55344 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.31□□□□□ -1.88
LIM2P55344 HSFY5P-201ENST00000453726 309 ntBASIC3.31□□□□□ -1.88
LIM2P55344 FCF1P6-201ENST00000456841 595 ntBASIC3.31□□□□□ -1.88
LIM2P55344 U3.44-201ENST00000458938 192 ntBASIC3.31□□□□□ -1.88
LIM2P55344 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.31□□□□□ -1.88
LIM2P55344 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.31□□□□□ -1.88
LIM2P55344 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.31□□□□□ -1.88
LIM2P55344 AC023632.1-201ENST00000518463 375 ntBASIC3.31□□□□□ -1.88
LIM2P55344 IGKV2D-19-201ENST00000523346 262 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms