Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 Y_RNA.542-201ENST00000384641 111 ntBASIC7.46□□□□□ -1.22
ATN1P54259 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 AL354707.3-201ENST00000427308 331 ntBASIC7.46□□□□□ -1.22
ATN1P54259 RPL12P18-201ENST00000437175 325 ntBASIC7.46□□□□□ -1.22
ATN1P54259 MTCO1P44-201ENST00000441935 243 ntBASIC7.46□□□□□ -1.22
ATN1P54259 MTND6P5-201ENST00000448266 512 ntBASIC7.46□□□□□ -1.22
ATN1P54259 AC023141.9-201ENST00000458734 412 ntBASIC7.46□□□□□ -1.22
ATN1P54259 AC006511.1-201ENST00000470614 315 ntBASIC7.46□□□□□ -1.22
ATN1P54259 RN7SL705P-201ENST00000481678 294 ntBASIC7.46□□□□□ -1.22
ATN1P54259 AL160314.1-201ENST00000490836 438 ntBASIC7.46□□□□□ -1.22
ATN1P54259 AC146944.3-201ENST00000509969 371 ntBASIC7.46□□□□□ -1.22
ATN1P54259 RNU7-121P-201ENST00000516604 62 ntBASIC7.46□□□□□ -1.22
ATN1P54259 AL590705.4-201ENST00000532209 134 ntBASIC7.46□□□□□ -1.22
ATN1P54259 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC7.46□□□□□ -1.22
ATN1P54259 VN1R84P-201ENST00000593697 235 ntBASIC7.46□□□□□ -1.22
ATN1P54259 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.46□□□□□ -1.22
ATN1P54259 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 AC089998.1-201ENST00000548575 3141 ntBASIC7.46□□□□□ -1.22
ATN1P54259 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
ATN1P54259 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ATN1P54259 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
ATN1P54259 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
ATN1P54259 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.45□□□□□ -1.22
ATN1P54259 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
ATN1P54259 AC083843.3-201ENST00000623679 2186 ntBASIC7.45□□□□□ -1.22
ATN1P54259 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ATN1P54259 SNORA12.1-201ENST00000390873 148 ntBASIC7.45□□□□□ -1.22
ATN1P54259 RNU6-1275P-201ENST00000391087 107 ntBASIC7.45□□□□□ -1.22
ATN1P54259 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.45□□□□□ -1.22
ATN1P54259 RPS3P2-201ENST00000421346 701 ntBASIC7.45□□□□□ -1.22
ATN1P54259 AC024067.1-201ENST00000426199 223 ntBASIC7.45□□□□□ -1.22
ATN1P54259 AC092573.2-201ENST00000434546 243 ntBASIC7.45□□□□□ -1.22
ATN1P54259 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.45□□□□□ -1.22
ATN1P54259 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC7.45□□□□□ -1.22
ATN1P54259 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC7.45□□□□□ -1.22
ATN1P54259 RPL30P11-201ENST00000495304 339 ntBASIC7.45□□□□□ -1.22
ATN1P54259 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC7.45□□□□□ -1.22
ATN1P54259 NDUFB4P11-201ENST00000560510 395 ntBASIC7.45□□□□□ -1.22
ATN1P54259 MIR4443-201ENST00000585052 53 ntBASIC7.45□□□□□ -1.22
ATN1P54259 AL590099.1-201ENST00000615276 138 ntBASIC7.45□□□□□ -1.22
ATN1P54259 AC011476.5-201ENST00000615594 130 ntBASIC7.45□□□□□ -1.22
ATN1P54259 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC7.45□□□□□ -1.22
ATN1P54259 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.45□□□□□ -1.22
ATN1P54259 SMG1P5-202ENST00000529428 4219 ntBASIC7.45□□□□□ -1.22
ATN1P54259 SMG1P2-201ENST00000566127 4221 ntBASIC7.45□□□□□ -1.22
ATN1P54259 NCAPGP1-201ENST00000505112 1814 ntBASIC7.45□□□□□ -1.22
ATN1P54259 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ATN1P54259 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
ATN1P54259 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 NCOA4P3-201ENST00000513203 1877 ntBASIC7.45□□□□□ -1.22
ATN1P54259 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
ATN1P54259 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
ATN1P54259 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATN1P54259 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
ATN1P54259 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATN1P54259 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ATN1P54259 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ATN1P54259 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.44□□□□□ -1.22
ATN1P54259 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
ATN1P54259 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.44□□□□□ -1.22
ATN1P54259 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATN1P54259 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.44□□□□□ -1.22
ATN1P54259 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.44□□□□□ -1.22
ATN1P54259 RNU6-653P-201ENST00000363074 106 ntBASIC7.44□□□□□ -1.22
ATN1P54259 Y_RNA.116-201ENST00000363292 103 ntBASIC7.44□□□□□ -1.22
ATN1P54259 RNA5SP510-201ENST00000364697 99 ntBASIC7.44□□□□□ -1.22
ATN1P54259 LCN1P2-201ENST00000372030 223 ntBASIC7.44□□□□□ -1.22
ATN1P54259 SNORA46.1-201ENST00000391069 153 ntBASIC7.44□□□□□ -1.22
ATN1P54259 TMSB10P2-201ENST00000416049 131 ntBASIC7.44□□□□□ -1.22
ATN1P54259 AL358176.3-201ENST00000420757 454 ntBASIC7.44□□□□□ -1.22
ATN1P54259 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.44□□□□□ -1.22
ATN1P54259 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.44□□□□□ -1.22
ATN1P54259 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.44□□□□□ -1.22
ATN1P54259 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms