Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.28□□□□□ -1.88
NUP98P52948 FRG1DP-201ENST00000635586 771 ntBASIC3.28□□□□□ -1.88
NUP98P52948 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP98P52948 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NUP98P52948 NCSTNP1-201ENST00000406229 144 ntBASIC3.28□□□□□ -1.88
NUP98P52948 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.28□□□□□ -1.88
NUP98P52948 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.28□□□□□ -1.88
NUP98P52948 AC021146.5-201ENST00000503544 545 ntBASIC3.28□□□□□ -1.88
NUP98P52948 AC100870.1-201ENST00000522035 505 ntBASIC3.28□□□□□ -1.88
NUP98P52948 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.28□□□□□ -1.88
NUP98P52948 MIR4435-1-201ENST00000582552 80 ntBASIC3.28□□□□□ -1.88
NUP98P52948 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP98P52948 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.27□□□□□ -1.89
NUP98P52948 AL450263.2-201ENST00000439400 589 ntBASIC3.27□□□□□ -1.89
NUP98P52948 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP98P52948 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
NUP98P52948 ANXA2P1-201ENST00000505539 926 ntBASIC3.27□□□□□ -1.89
NUP98P52948 RNU6-943P-201ENST00000516960 98 ntBASIC3.27□□□□□ -1.89
NUP98P52948 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP98P52948 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP98P52948 AL355836.1-201ENST00000555951 870 ntBASIC3.27□□□□□ -1.89
NUP98P52948 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP98P52948 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP98P52948 AC008725.1-201ENST00000605123 2263 ntBASIC3.27□□□□□ -1.89
NUP98P52948 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.27□□□□□ -1.89
NUP98P52948 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NUP98P52948 ZNF658B-202ENST00000615961 3375 ntBASIC3.26□□□□□ -1.89
NUP98P52948 AC016717.2-201ENST00000609089 5141 ntBASIC3.26□□□□□ -1.89
NUP98P52948 MIR181A2-201ENST00000384863 110 ntBASIC3.26□□□□□ -1.89
NUP98P52948 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP98P52948 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUP98P52948 FCF1P1-201ENST00000432690 571 ntBASIC3.26□□□□□ -1.89
NUP98P52948 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUP98P52948 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP98P52948 SNORA9.3-201ENST00000516383 129 ntBASIC3.26□□□□□ -1.89
NUP98P52948 RNA5SP24-201ENST00000516478 95 ntBASIC3.26□□□□□ -1.89
NUP98P52948 RNU6-1231P-201ENST00000517185 103 ntBASIC3.26□□□□□ -1.89
NUP98P52948 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP98P52948 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUP98P52948 OR8L1P-201ENST00000534005 955 ntBASIC3.26□□□□□ -1.89
NUP98P52948 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP98P52948 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP98P52948 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP98P52948 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
NUP98P52948 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP98P52948 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUP98P52948 AL451074.5-201ENST00000415894 435 ntBASIC3.26□□□□□ -1.89
NUP98P52948 AC017037.2-201ENST00000513850 890 ntBASIC3.26□□□□□ -1.89
NUP98P52948 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP98P52948 MTND2P17-201ENST00000550281 688 ntBASIC3.26□□□□□ -1.89
NUP98P52948 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.26□□□□□ -1.89
NUP98P52948 AC007621.1-201ENST00000604544 437 ntBASIC3.26□□□□□ -1.89
NUP98P52948 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP98P52948 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP98P52948 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP98P52948 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NUP98P52948 MIR1183-201ENST00000408856 89 ntBASIC3.25□□□□□ -1.89
NUP98P52948 HSPE1P22-201ENST00000456856 327 ntBASIC3.25□□□□□ -1.89
NUP98P52948 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.25□□□□□ -1.89
NUP98P52948 MTND2P13-201ENST00000577438 1039 ntBASIC3.25□□□□□ -1.89
NUP98P52948 AC023813.4-201ENST00000607580 580 ntBASIC3.25□□□□□ -1.89
NUP98P52948 AC010338.1-201ENST00000621823 717 ntBASIC3.25□□□□□ -1.89
NUP98P52948 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP98P52948 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NUP98P52948 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP98P52948 AP000526.1-201ENST00000603308 1388 ntBASIC3.25□□□□□ -1.89
NUP98P52948 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUP98P52948 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
NUP98P52948 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP98P52948 RNU1-87P-201ENST00000363727 170 ntBASIC3.24□□□□□ -1.89
NUP98P52948 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUP98P52948 BTF3P7-201ENST00000407097 488 ntBASIC3.24□□□□□ -1.89
NUP98P52948 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP98P52948 RPL23AP15-201ENST00000450202 459 ntBASIC3.24□□□□□ -1.89
NUP98P52948 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUP98P52948 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP98P52948 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP98P52948 TXNP6-201ENST00000510190 310 ntBASIC3.24□□□□□ -1.89
NUP98P52948 AC008413.1-201ENST00000511864 177 ntBASIC3.24□□□□□ -1.89
NUP98P52948 AF186190.1-201ENST00000517470 480 ntBASIC3.24□□□□□ -1.89
NUP98P52948 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP98P52948 MIR3605-201ENST00000583214 100 ntBASIC3.24□□□□□ -1.89
NUP98P52948 AC096586.2-201ENST00000610260 441 ntBASIC3.24□□□□□ -1.89
NUP98P52948 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.24□□□□□ -1.89
NUP98P52948 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP98P52948 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP98P52948 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP98P52948 HSPD1P16-201ENST00000402302 394 ntBASIC3.23□□□□□ -1.89
NUP98P52948 RPS4XP7-201ENST00000406274 780 ntBASIC3.23□□□□□ -1.89
NUP98P52948 AC105402.1-201ENST00000413336 545 ntBASIC3.23□□□□□ -1.89
NUP98P52948 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP98P52948 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
NUP98P52948 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP98P52948 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP98P52948 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP98P52948 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
NUP98P52948 AC116096.1-201ENST00000566804 2314 ntBASIC3.23□□□□□ -1.89
NUP98P52948 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP98P52948 AL512633.1-201ENST00000399931 655 ntBASIC3.23□□□□□ -1.89
NUP98P52948 RPS20P5-201ENST00000434808 360 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms