Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SMARCA2P51531 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMARCA2P51531 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMARCA2P51531 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMARCA2P51531 OR51A3P-201ENST00000413596 924 ntBASIC4.91□□□□□ -1.62
SMARCA2P51531 SNRPGP5-201ENST00000456003 220 ntBASIC4.91□□□□□ -1.62
SMARCA2P51531 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMARCA2P51531 RN7SKP60-201ENST00000516985 239 ntBASIC4.91□□□□□ -1.62
SMARCA2P51531 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.91□□□□□ -1.62
SMARCA2P51531 AC006111.3-201ENST00000622137 383 ntBASIC4.91□□□□□ -1.62
SMARCA2P51531 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SMARCA2P51531 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SMARCA2P51531 SNORA46-201ENST00000384762 135 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 5S_rRNA.2-201ENST00000391293 112 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 SKINT1L-201ENST00000401057 817 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA2P51531 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA2P51531 AC004801.2-202ENST00000463559 283 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 AC133134.1-201ENST00000466800 359 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 AC003982.1-202ENST00000469928 248 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA2P51531 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA2P51531 AC096725.1-201ENST00000514266 313 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.9□□□□□ -1.63
SMARCA2P51531 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.9□□□□□ -1.63
SMARCA2P51531 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA2P51531 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SMARCA2P51531 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.89□□□□□ -1.63
SMARCA2P51531 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SMARCA2P51531 RNA5SP99-201ENST00000364020 114 ntBASIC4.89□□□□□ -1.63
SMARCA2P51531 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.89□□□□□ -1.63
SMARCA2P51531 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.89□□□□□ -1.63
SMARCA2P51531 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.89□□□□□ -1.63
SMARCA2P51531 RPL23AP4-201ENST00000427757 463 ntBASIC4.89□□□□□ -1.63
SMARCA2P51531 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.89□□□□□ -1.63
SMARCA2P51531 AC092851.1-201ENST00000535964 478 ntBASIC4.89□□□□□ -1.63
SMARCA2P51531 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.89□□□□□ -1.63
SMARCA2P51531 AL139286.1-201ENST00000604465 483 ntBASIC4.89□□□□□ -1.63
SMARCA2P51531 AL356274.1-201ENST00000617064 410 ntBASIC4.89□□□□□ -1.63
SMARCA2P51531 AC025034.2-201ENST00000623264 286 ntBASIC4.89□□□□□ -1.63
SMARCA2P51531 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMARCA2P51531 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.89□□□□□ -1.63
SMARCA2P51531 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SMARCA2P51531 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMARCA2P51531 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMARCA2P51531 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.88□□□□□ -1.63
SMARCA2P51531 AL513043.1-201ENST00000439124 535 ntBASIC4.88□□□□□ -1.63
SMARCA2P51531 AC006539.3-201ENST00000454258 129 ntBASIC4.88□□□□□ -1.63
SMARCA2P51531 RN7SL633P-201ENST00000488974 297 ntBASIC4.88□□□□□ -1.63
SMARCA2P51531 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.88□□□□□ -1.63
SMARCA2P51531 AC005351.1-201ENST00000511152 786 ntBASIC4.88□□□□□ -1.63
SMARCA2P51531 RNU6-548P-201ENST00000517083 115 ntBASIC4.88□□□□□ -1.63
SMARCA2P51531 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.88□□□□□ -1.63
SMARCA2P51531 IGKV2D-23-201ENST00000518179 286 ntBASIC4.88□□□□□ -1.63
SMARCA2P51531 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.88□□□□□ -1.63
SMARCA2P51531 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.88□□□□□ -1.63
SMARCA2P51531 AL392112.1-201ENST00000605115 829 ntBASIC4.88□□□□□ -1.63
SMARCA2P51531 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SMARCA2P51531 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCA2P51531 RPS3AP26-201ENST00000398259 784 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCA2P51531 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.87□□□□□ -1.63
SMARCA2P51531 AC010468.1-201ENST00000461022 817 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMARCA2P51531 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.87□□□□□ -1.63
SMARCA2P51531 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.87□□□□□ -1.63
SMARCA2P51531 TRAV37-201ENST00000553906 342 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 Y_RNA.4-201ENST00000362333 112 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 RPS6P12-201ENST00000432491 726 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 HMGN2P3-201ENST00000433603 273 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 HMGN2P5-201ENST00000436882 273 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.87□□□□□ -1.63
SMARCA2P51531 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
SMARCA2P51531 RNA5SP320-201ENST00000516263 124 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 UBTFL10-201ENST00000528532 562 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.87□□□□□ -1.63
SMARCA2P51531 AC015712.3-201ENST00000559380 164 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 AC025811.1-201ENST00000604312 472 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 AC008121.2-201ENST00000614647 523 ntBASIC4.87□□□□□ -1.63
SMARCA2P51531 OR11H5P-202ENST00000641612 1325 ntBASIC4.86□□□□□ -1.63
SMARCA2P51531 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCA2P51531 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.86□□□□□ -1.63
SMARCA2P51531 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.86□□□□□ -1.63
SMARCA2P51531 RPS20P5-201ENST00000434808 360 ntBASIC4.86□□□□□ -1.63
SMARCA2P51531 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMARCA2P51531 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
SMARCA2P51531 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SMARCA2P51531 AC093311.1-201ENST00000506586 2021 ntBASIC4.85□□□□□ -1.63
SMARCA2P51531 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SMARCA2P51531 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.85□□□□□ -1.63
SMARCA2P51531 U3.6-201ENST00000363622 211 ntBASIC4.85□□□□□ -1.63
SMARCA2P51531 U3.11-201ENST00000364476 212 ntBASIC4.85□□□□□ -1.63
SMARCA2P51531 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA2P51531 MIR518C-201ENST00000384822 101 ntBASIC4.85□□□□□ -1.63
SMARCA2P51531 MIR3074-201ENST00000384885 81 ntBASIC4.85□□□□□ -1.63
SMARCA2P51531 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.85□□□□□ -1.63
SMARCA2P51531 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.85□□□□□ -1.63
SMARCA2P51531 RPL23AP22-201ENST00000437556 453 ntBASIC4.85□□□□□ -1.63
SMARCA2P51531 SRIP1-201ENST00000489235 288 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms