Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC087312.1-201ENST00000471411 480 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AC015724.1-201ENST00000478577 156 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.59□□□□□ -1.83
CASP4P49662 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.59□□□□□ -1.83
CASP4P49662 SCARNA20.6-201ENST00000517251 106 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.59□□□□□ -1.83
CASP4P49662 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.59□□□□□ -1.83
CASP4P49662 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.59□□□□□ -1.83
CASP4P49662 NCAPGP2-201ENST00000557911 754 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AC079148.1-201ENST00000565944 819 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AC095057.3-201ENST00000567102 1157 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.59□□□□□ -1.83
CASP4P49662 ZNF415P1-201ENST00000582279 1166 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.59□□□□□ -1.83
CASP4P49662 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.59□□□□□ -1.83
CASP4P49662 MIR92B-201ENST00000607575 96 ntBASIC3.59□□□□□ -1.83
CASP4P49662 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.59□□□□□ -1.83
CASP4P49662 uc_338.1-201ENST00000612113 180 ntBASIC3.59□□□□□ -1.83
CASP4P49662 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CASP4P49662 AL392048.1-201ENST00000613946 534 ntBASIC3.59□□□□□ -1.83
CASP4P49662 AL445493.3-201ENST00000619568 477 ntBASIC3.59□□□□□ -1.83
CASP4P49662 SNORD39.4-201ENST00000620099 78 ntBASIC3.59□□□□□ -1.83
CASP4P49662 MTCO1P6-201ENST00000481192 1384 ntBASIC3.59□□□□□ -1.83
CASP4P49662 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CASP4P49662 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
CASP4P49662 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CASP4P49662 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CASP4P49662 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CASP4P49662 MTCO1P24-201ENST00000515438 1558 ntBASIC3.59□□□□□ -1.84
CASP4P49662 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CASP4P49662 AC107081.3-201ENST00000612715 2034 ntBASIC3.58□□□□□ -1.84
CASP4P49662 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CASP4P49662 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CASP4P49662 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.58□□□□□ -1.84
CASP4P49662 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CASP4P49662 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.58□□□□□ -1.84
CASP4P49662 ATP5F1P6-201ENST00000402768 767 ntBASIC3.58□□□□□ -1.84
CASP4P49662 RNU6-272P-201ENST00000411028 104 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.58□□□□□ -1.84
CASP4P49662 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CASP4P49662 AL158050.1-201ENST00000416077 457 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC005300.1-201ENST00000428401 373 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.58□□□□□ -1.84
CASP4P49662 CKS1BP5-201ENST00000434172 273 ntBASIC3.58□□□□□ -1.84
CASP4P49662 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.58□□□□□ -1.84
CASP4P49662 RPS26P56-201ENST00000444468 240 ntBASIC3.58□□□□□ -1.84
CASP4P49662 MTND1P33-201ENST00000446251 917 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.58□□□□□ -1.84
CASP4P49662 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.58□□□□□ -1.84
CASP4P49662 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.58□□□□□ -1.84
CASP4P49662 HMGN1P18-201ENST00000457642 277 ntBASIC3.58□□□□□ -1.84
CASP4P49662 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.58□□□□□ -1.84
CASP4P49662 CYCSP20-201ENST00000473154 315 ntBASIC3.58□□□□□ -1.84
CASP4P49662 HSPD1P15-201ENST00000505573 1122 ntBASIC3.58□□□□□ -1.84
CASP4P49662 APOOP4-201ENST00000513530 597 ntBASIC3.58□□□□□ -1.84
CASP4P49662 FABP5P12-201ENST00000515543 389 ntBASIC3.58□□□□□ -1.84
CASP4P49662 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.58□□□□□ -1.84
CASP4P49662 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CASP4P49662 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.58□□□□□ -1.84
CASP4P49662 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.58□□□□□ -1.84
CASP4P49662 AP003717.3-201ENST00000544832 1180 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.58□□□□□ -1.84
CASP4P49662 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.58□□□□□ -1.84
CASP4P49662 AC017100.2-201ENST00000584628 355 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC008739.3-201ENST00000603262 127 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC112503.2-201ENST00000609005 552 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC069200.1-201ENST00000609511 323 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC019176.2-201ENST00000611579 315 ntBASIC3.58□□□□□ -1.84
CASP4P49662 MIR6075-201ENST00000620782 95 ntBASIC3.58□□□□□ -1.84
CASP4P49662 AC244100.1-202ENST00000621554 382 ntBASIC3.58□□□□□ -1.84
CASP4P49662 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CASP4P49662 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.58□□□□□ -1.84
CASP4P49662 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CASP4P49662 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CASP4P49662 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CASP4P49662 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASP4P49662 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
CASP4P49662 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASP4P49662 AF117829.1-206ENST00000621883 3802 ntBASIC3.57□□□□□ -1.84
CASP4P49662 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASP4P49662 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASP4P49662 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASP4P49662 RNU1-75P-201ENST00000347264 129 ntBASIC3.57□□□□□ -1.84
CASP4P49662 MIR16-2-201ENST00000362117 81 ntBASIC3.57□□□□□ -1.84
CASP4P49662 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
CASP4P49662 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASP4P49662 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CASP4P49662 DSTNP4-201ENST00000399472 474 ntBASIC3.57□□□□□ -1.84
CASP4P49662 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
CASP4P49662 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.57□□□□□ -1.84
CASP4P49662 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.57□□□□□ -1.84
CASP4P49662 RPS7P13-201ENST00000413955 498 ntBASIC3.57□□□□□ -1.84
CASP4P49662 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.57□□□□□ -1.84
CASP4P49662 AC012065.2-201ENST00000421295 375 ntBASIC3.57□□□□□ -1.84
CASP4P49662 AC241520.1-201ENST00000422654 1099 ntBASIC3.57□□□□□ -1.84
CASP4P49662 MTCO1P43-201ENST00000431831 488 ntBASIC3.57□□□□□ -1.84
CASP4P49662 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.57□□□□□ -1.84
CASP4P49662 AC005019.1-201ENST00000436455 431 ntBASIC3.57□□□□□ -1.84
CASP4P49662 MTND5P28-201ENST00000438005 1594 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms