Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SOX2P48431 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SOX2P48431 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SOX2P48431 AC012020.1-201ENST00000624541 1728 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC097714.1-201ENST00000511272 1647 ntBASIC4.07□□□□□ -1.76
SOX2P48431 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SOX2P48431 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.07□□□□□ -1.76
SOX2P48431 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.07□□□□□ -1.76
SOX2P48431 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 RNU6-28P-201ENST00000362378 107 ntBASIC4.07□□□□□ -1.76
SOX2P48431 RNU6-343P-201ENST00000364709 104 ntBASIC4.07□□□□□ -1.76
SOX2P48431 RNU6-744P-201ENST00000365557 107 ntBASIC4.07□□□□□ -1.76
SOX2P48431 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 RNU6-1316P-201ENST00000384242 108 ntBASIC4.07□□□□□ -1.76
SOX2P48431 RPL31P1-201ENST00000398116 372 ntBASIC4.07□□□□□ -1.76
SOX2P48431 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX2P48431 VDAC1P9-201ENST00000412766 841 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC012065.2-201ENST00000421295 375 ntBASIC4.07□□□□□ -1.76
SOX2P48431 GLRXP1-201ENST00000423261 334 ntBASIC4.07□□□□□ -1.76
SOX2P48431 OR8F1P-201ENST00000425243 930 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 NANOGP6-201ENST00000429190 847 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX2P48431 RPL22P17-201ENST00000438729 315 ntBASIC4.07□□□□□ -1.76
SOX2P48431 RPL12P11-201ENST00000439970 501 ntBASIC4.07□□□□□ -1.76
SOX2P48431 DNAJC19P4-201ENST00000440115 345 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX2P48431 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX2P48431 RPL5P30-201ENST00000465511 891 ntBASIC4.07□□□□□ -1.76
SOX2P48431 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 HMGB1P36-201ENST00000487709 576 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC108022.1-201ENST00000493466 478 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC034222.1-201ENST00000494052 532 ntBASIC4.07□□□□□ -1.76
SOX2P48431 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 AC105252.1-201ENST00000503089 286 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX2P48431 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 AC110775.1-201ENST00000513721 462 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC016065.2-201ENST00000514530 444 ntBASIC4.07□□□□□ -1.76
SOX2P48431 RNU6-506P-201ENST00000516553 94 ntBASIC4.07□□□□□ -1.76
SOX2P48431 SNORA18.6-201ENST00000516792 115 ntBASIC4.07□□□□□ -1.76
SOX2P48431 DEFB108A-201ENST00000530110 222 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 MIR4310-201ENST00000582950 57 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC091178.1-203ENST00000584586 279 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.07□□□□□ -1.76
SOX2P48431 AC233280.2-201ENST00000603917 1070 ntBASIC4.07□□□□□ -1.76
SOX2P48431 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 AC090578.1-201ENST00000604955 591 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX2P48431 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX2P48431 AP001521.2-201ENST00000608772 546 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC007684.1-201ENST00000609671 477 ntBASIC4.07□□□□□ -1.76
SOX2P48431 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 EIF3FP1-201ENST00000613970 806 ntBASIC4.07□□□□□ -1.76
SOX2P48431 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 AC004009.2-201ENST00000623016 728 ntBASIC4.07□□□□□ -1.76
SOX2P48431 AC055839.1-201ENST00000634467 498 ntBASIC4.07□□□□□ -1.76
SOX2P48431 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX2P48431 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX2P48431 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX2P48431 PABPC1P6-201ENST00000445594 1829 ntBASIC4.07□□□□□ -1.76
SOX2P48431 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX2P48431 SAGE4P-201ENST00000442271 3381 ntBASIC4.06□□□□□ -1.76
SOX2P48431 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 SAGE2P-201ENST00000420011 2126 ntBASIC4.06□□□□□ -1.76
SOX2P48431 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX2P48431 RN7SKP115-201ENST00000363177 317 ntBASIC4.06□□□□□ -1.76
SOX2P48431 SNORD82-201ENST00000365530 70 ntBASIC4.06□□□□□ -1.76
SOX2P48431 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 RNU6-878P-201ENST00000384578 110 ntBASIC4.06□□□□□ -1.76
SOX2P48431 RNA5SP146-201ENST00000410743 123 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 AC114755.2-201ENST00000413520 361 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 RPL31P45-201ENST00000419532 356 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AL358176.3-201ENST00000420757 454 ntBASIC4.06□□□□□ -1.76
SOX2P48431 PDSS1P1-201ENST00000422953 1114 ntBASIC4.06□□□□□ -1.76
SOX2P48431 CHEK2P5-201ENST00000423877 246 ntBASIC4.06□□□□□ -1.76
SOX2P48431 ISCA1P1-201ENST00000426679 387 ntBASIC4.06□□□□□ -1.76
SOX2P48431 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX2P48431 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX2P48431 PGBD4P3-201ENST00000440731 581 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AC093392.2-201ENST00000450682 337 ntBASIC4.06□□□□□ -1.76
SOX2P48431 AL162388.1-201ENST00000450912 352 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms