Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC124293.1-201ENST00000530034 493 ntBASIC3.71□□□□□ -1.82
BRCC3P46736 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.71□□□□□ -1.82
BRCC3P46736 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BRCC3P46736 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
BRCC3P46736 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.71□□□□□ -1.82
BRCC3P46736 AGGF1P8-201ENST00000562979 1000 ntBASIC3.71□□□□□ -1.82
BRCC3P46736 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.71□□□□□ -1.82
BRCC3P46736 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.71□□□□□ -1.82
BRCC3P46736 AC067852.3-201ENST00000589177 561 ntBASIC3.71□□□□□ -1.82
BRCC3P46736 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.71□□□□□ -1.82
BRCC3P46736 AC083899.3-201ENST00000603413 594 ntBASIC3.71□□□□□ -1.82
BRCC3P46736 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.71□□□□□ -1.82
BRCC3P46736 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.71□□□□□ -1.82
BRCC3P46736 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
BRCC3P46736 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BRCC3P46736 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
BRCC3P46736 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
BRCC3P46736 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BRCC3P46736 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.71□□□□□ -1.82
BRCC3P46736 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
BRCC3P46736 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRCC3P46736 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.7□□□□□ -1.82
BRCC3P46736 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
BRCC3P46736 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.7□□□□□ -1.82
BRCC3P46736 RNA5SP120-201ENST00000410900 112 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 UBE2V1P9-201ENST00000414760 368 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 HSFY1P1-201ENST00000423928 1178 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.7□□□□□ -1.82
BRCC3P46736 AC002542.1-201ENST00000440683 193 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 MTND1P33-201ENST00000446251 917 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC005002.1-201ENST00000447458 540 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 OR51B8P-201ENST00000449892 769 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 DNAJC19P8-201ENST00000452887 259 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.7□□□□□ -1.82
BRCC3P46736 RNU7-140P-201ENST00000459546 60 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 RN7SL594P-201ENST00000470590 287 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC023598.1-201ENST00000472521 361 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC073522.1-201ENST00000483312 377 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC008427.1-201ENST00000503102 655 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.7□□□□□ -1.82
BRCC3P46736 AC026427.2-201ENST00000506228 536 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC090071.1-201ENST00000507713 644 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRCC3P46736 AC110792.2-201ENST00000510278 224 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.7□□□□□ -1.82
BRCC3P46736 OR5AP1P-201ENST00000529730 940 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.7□□□□□ -1.82
BRCC3P46736 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.7□□□□□ -1.82
BRCC3P46736 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRCC3P46736 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.7□□□□□ -1.82
BRCC3P46736 AL133457.1-201ENST00000564251 987 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC010735.1-201ENST00000567305 1026 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 MIR5195-201ENST00000583555 115 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AL022067.1-201ENST00000602426 454 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AP002906.1-201ENST00000603405 233 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AP002802.2-201ENST00000605877 235 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.7□□□□□ -1.82
BRCC3P46736 AC013468.1-201ENST00000608680 598 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC022079.2-201ENST00000619739 566 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.7□□□□□ -1.82
BRCC3P46736 MIR3651-201ENST00000630427 90 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 AL121594.5-201ENST00000631724 573 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 OR4G3P-201ENST00000633500 913 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 OR6C71P-202ENST00000641886 1107 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRCC3P46736 AC011978.2-201ENST00000569835 2054 ntBASIC3.7□□□□□ -1.82
BRCC3P46736 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRCC3P46736 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
BRCC3P46736 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRCC3P46736 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRCC3P46736 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
BRCC3P46736 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
BRCC3P46736 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRCC3P46736 XIAPP3-201ENST00000312918 795 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRCC3P46736 RNA5SP391-201ENST00000363456 119 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.69□□□□□ -1.82
BRCC3P46736 PRRC2CP1-201ENST00000404428 159 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 RNU2-21P-201ENST00000410368 188 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 RPF2P1-201ENST00000424137 906 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 MTCO2P23-201ENST00000425216 680 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 MRPS18BP2-201ENST00000434310 759 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.69□□□□□ -1.82
BRCC3P46736 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.69□□□□□ -1.82
BRCC3P46736 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.69□□□□□ -1.82
BRCC3P46736 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRCC3P46736 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.69□□□□□ -1.82
BRCC3P46736 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.69□□□□□ -1.82
BRCC3P46736 AC005351.1-201ENST00000511152 786 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 RNA5SP309-201ENST00000516670 106 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 RN7SKP96-201ENST00000516948 297 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 SCARNA1-201ENST00000517138 166 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
BRCC3P46736 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.69□□□□□ -1.82
BRCC3P46736 AC006518.2-201ENST00000542513 940 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
BRCC3P46736 AC011611.5-201ENST00000552477 578 ntBASIC3.69□□□□□ -1.82
BRCC3P46736 AL442163.2-201ENST00000553912 710 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms