Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL356968.1-201ENST00000416622 474 ntBASIC4.01□□□□□ -1.77
RFC4P35249 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC4P35249 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC4P35249 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC4P35249 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC4P35249 HMGB1P16-201ENST00000447155 540 ntBASIC4.01□□□□□ -1.77
RFC4P35249 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC4P35249 MTCO3P20-201ENST00000454926 688 ntBASIC4.01□□□□□ -1.77
RFC4P35249 RPL37P6-202ENST00000464216 403 ntBASIC4.01□□□□□ -1.77
RFC4P35249 AC146507.1-201ENST00000468335 354 ntBASIC4.01□□□□□ -1.77
RFC4P35249 AC104687.1-201ENST00000485829 412 ntBASIC4.01□□□□□ -1.77
RFC4P35249 AL035404.1-201ENST00000497982 568 ntBASIC4.01□□□□□ -1.77
RFC4P35249 HMGB1P3-201ENST00000502802 616 ntBASIC4.01□□□□□ -1.77
RFC4P35249 AC092851.1-201ENST00000535964 478 ntBASIC4.01□□□□□ -1.77
RFC4P35249 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.01□□□□□ -1.77
RFC4P35249 MIR3162-201ENST00000581818 82 ntBASIC4.01□□□□□ -1.77
RFC4P35249 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.01□□□□□ -1.77
RFC4P35249 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC4P35249 AC103710.3-201ENST00000608157 948 ntBASIC4.01□□□□□ -1.77
RFC4P35249 AC110792.4-201ENST00000609843 298 ntBASIC4.01□□□□□ -1.77
RFC4P35249 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RFC4P35249 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFC4P35249 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.01□□□□□ -1.77
RFC4P35249 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4□□□□□ -1.77
RFC4P35249 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RFC4P35249 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RFC4P35249 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4□□□□□ -1.77
RFC4P35249 RNA5SP391-201ENST00000363456 119 ntBASIC4□□□□□ -1.77
RFC4P35249 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4□□□□□ -1.77
RFC4P35249 SNORD15B-201ENST00000384714 146 ntBASIC4□□□□□ -1.77
RFC4P35249 RN7SKP56-201ENST00000410513 331 ntBASIC4□□□□□ -1.77
RFC4P35249 RNA5SP229-201ENST00000410809 99 ntBASIC4□□□□□ -1.77
RFC4P35249 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4□□□□□ -1.77
RFC4P35249 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4□□□□□ -1.77
RFC4P35249 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4□□□□□ -1.77
RFC4P35249 AC093770.1-201ENST00000511559 571 ntBASIC4□□□□□ -1.77
RFC4P35249 AC091826.1-201ENST00000514065 313 ntBASIC4□□□□□ -1.77
RFC4P35249 AC103783.1-201ENST00000520506 373 ntBASIC4□□□□□ -1.77
RFC4P35249 NDUFB9P3-201ENST00000521269 501 ntBASIC4□□□□□ -1.77
RFC4P35249 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4□□□□□ -1.77
RFC4P35249 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4□□□□□ -1.77
RFC4P35249 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4□□□□□ -1.77
RFC4P35249 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4□□□□□ -1.77
RFC4P35249 OR6C73P-201ENST00000546432 358 ntBASIC4□□□□□ -1.77
RFC4P35249 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4□□□□□ -1.77
RFC4P35249 AL121576.1-201ENST00000556055 276 ntBASIC4□□□□□ -1.77
RFC4P35249 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4□□□□□ -1.77
RFC4P35249 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4□□□□□ -1.77
RFC4P35249 PRELID3BP8-201ENST00000604148 295 ntBASIC4□□□□□ -1.77
RFC4P35249 AC013412.1-201ENST00000610687 192 ntBASIC4□□□□□ -1.77
RFC4P35249 uc_338.25-201ENST00000613756 156 ntBASIC4□□□□□ -1.77
RFC4P35249 AP004607.9-201ENST00000618202 316 ntBASIC4□□□□□ -1.77
RFC4P35249 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4□□□□□ -1.77
RFC4P35249 AL049737.1-201ENST00000413920 1403 ntBASIC4□□□□□ -1.77
RFC4P35249 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4□□□□□ -1.77
RFC4P35249 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RFC4P35249 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RFC4P35249 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC4P35249 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC4P35249 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RFC4P35249 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC4P35249 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFC4P35249 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.99□□□□□ -1.77
RFC4P35249 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC4P35249 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC4P35249 AL138878.1-201ENST00000405131 347 ntBASIC3.99□□□□□ -1.77
RFC4P35249 RNU2-37P-201ENST00000410695 177 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.99□□□□□ -1.77
RFC4P35249 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC4P35249 AC000041.1-201ENST00000439655 175 ntBASIC3.99□□□□□ -1.77
RFC4P35249 ARL5AP2-201ENST00000444698 533 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AL513343.1-201ENST00000451818 792 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC4P35249 AC096992.1-201ENST00000459808 709 ntBASIC3.99□□□□□ -1.77
RFC4P35249 PRDX3P4-201ENST00000470828 747 ntBASIC3.99□□□□□ -1.77
RFC4P35249 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.99□□□□□ -1.77
RFC4P35249 MTCO1P31-201ENST00000506355 492 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AC090071.1-201ENST00000507713 644 ntBASIC3.99□□□□□ -1.77
RFC4P35249 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.99□□□□□ -1.77
RFC4P35249 POLR2KP1-201ENST00000553226 168 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AGGF1P8-201ENST00000562979 1000 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AL157394.1-201ENST00000562983 1224 ntBASIC3.99□□□□□ -1.77
RFC4P35249 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC4P35249 AP003485.2-201ENST00000623636 610 ntBASIC3.99□□□□□ -1.77
RFC4P35249 MTND5P3-201ENST00000438536 1800 ntBASIC3.99□□□□□ -1.77
RFC4P35249 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC4P35249 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFC4P35249 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFC4P35249 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.98□□□□□ -1.77
RFC4P35249 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFC4P35249 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFC4P35249 GTF2H2B-203ENST00000508065 1432 ntBASIC3.98□□□□□ -1.77
RFC4P35249 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.98□□□□□ -1.77
RFC4P35249 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFC4P35249 AC022031.1-201ENST00000585985 2593 ntBASIC3.98□□□□□ -1.77
RFC4P35249 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms