Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 ZNF734P-201ENST00000419494 1534 ntBASIC3.52□□□□□ -1.85
CASQ1P31415 AC233263.6-201ENST00000631132 1963 ntBASIC3.52□□□□□ -1.85
CASQ1P31415 AL353743.1-202ENST00000431724 1695 ntBASIC3.52□□□□□ -1.85
CASQ1P31415 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.51□□□□□ -1.85
CASQ1P31415 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CASQ1P31415 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CASQ1P31415 RNA5SP119-201ENST00000362715 117 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 Y_RNA.493-201ENST00000384422 102 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 MIR142-201ENST00000384835 87 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 RNA5SP56-201ENST00000410277 118 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 OFD1P18Y-201ENST00000420889 959 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.51□□□□□ -1.85
CASQ1P31415 UBE2V1P6-201ENST00000430840 422 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 AL035458.1-201ENST00000433096 585 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.51□□□□□ -1.85
CASQ1P31415 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.51□□□□□ -1.85
CASQ1P31415 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.51□□□□□ -1.85
CASQ1P31415 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.51□□□□□ -1.85
CASQ1P31415 PLGLA-201ENST00000465668 449 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.51□□□□□ -1.85
CASQ1P31415 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CASQ1P31415 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.51□□□□□ -1.85
CASQ1P31415 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.51□□□□□ -1.85
CASQ1P31415 AL451086.1-201ENST00000605596 223 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 AC084036.1-201ENST00000609190 508 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 AC069234.5-201ENST00000611056 416 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 AC005962.2-201ENST00000611427 652 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.51□□□□□ -1.85
CASQ1P31415 AC095031.1-201ENST00000623685 672 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 AC119674.1-220ENST00000641502 1048 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 AC093908.1-201ENST00000623125 8092 ntBASIC3.51□□□□□ -1.85
CASQ1P31415 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CASQ1P31415 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.5□□□□□ -1.85
CASQ1P31415 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.5□□□□□ -1.85
CASQ1P31415 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
CASQ1P31415 RNU6-799P-201ENST00000363567 107 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 MIR1289-1-201ENST00000408836 144 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 RNA5SP38-201ENST00000410750 119 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.5□□□□□ -1.85
CASQ1P31415 UBE2D3P2-201ENST00000424409 445 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC109583.1-201ENST00000432156 268 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 RPL21P2-201ENST00000440049 481 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.5□□□□□ -1.85
CASQ1P31415 HMGB1P23-201ENST00000518743 568 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC034205.1-201ENST00000520621 638 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC055876.1-202ENST00000567053 138 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC092474.3-201ENST00000603022 568 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC010591.1-201ENST00000603941 649 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC135178.6-201ENST00000605314 398 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AL391497.1-201ENST00000608671 547 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC099676.1-201ENST00000608886 657 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AC073348.1-201ENST00000623002 331 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AL356490.1-201ENST00000623079 479 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.5□□□□□ -1.85
CASQ1P31415 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CASQ1P31415 DDX6P1-205ENST00000441966 1436 ntBASIC3.5□□□□□ -1.85
CASQ1P31415 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.5□□□□□ -1.85
CASQ1P31415 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CASQ1P31415 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.49□□□□□ -1.85
CASQ1P31415 AC016716.1-201ENST00000265882 708 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 AC068538.1-201ENST00000376856 336 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CASQ1P31415 SSXP9-201ENST00000417503 292 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.49□□□□□ -1.85
CASQ1P31415 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.49□□□□□ -1.85
CASQ1P31415 AC073508.1-201ENST00000428866 656 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.49□□□□□ -1.85
CASQ1P31415 AC114755.5-201ENST00000447760 831 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.49□□□□□ -1.85
CASQ1P31415 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.49□□□□□ -1.85
CASQ1P31415 RPS29P12-201ENST00000460178 152 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.49□□□□□ -1.85
CASQ1P31415 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.49□□□□□ -1.85
CASQ1P31415 AC026412.2-201ENST00000512270 1075 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.49□□□□□ -1.85
CASQ1P31415 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.49□□□□□ -1.85
CASQ1P31415 AL391156.1-201ENST00000554965 554 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 MIR4284-201ENST00000578924 81 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 AC006116.7-201ENST00000590141 756 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 AC106791.2-201ENST00000604680 391 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 MIR6716-201ENST00000613413 80 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 MIR6875-201ENST00000617506 72 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.49□□□□□ -1.85
CASQ1P31415 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CASQ1P31415 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.49□□□□□ -1.85
CASQ1P31415 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CASQ1P31415 AP003122.5-201ENST00000527668 3766 ntBASIC3.49□□□□□ -1.85
CASQ1P31415 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.48□□□□□ -1.85
CASQ1P31415 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.48□□□□□ -1.85
CASQ1P31415 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.48□□□□□ -1.85
CASQ1P31415 AC091564.4-201ENST00000533934 2194 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms