Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL354685.2-201ENST00000448218 1447 ntBASIC4.63□□□□□ -1.67
CD40P25942 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 AC093535.2-201ENST00000624769 2326 ntBASIC4.63□□□□□ -1.67
CD40P25942 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 AC092070.2-203ENST00000598377 3644 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC232271.1-201ENST00000602455 2715 ntBASIC4.63□□□□□ -1.67
CD40P25942 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CD40P25942 MTCO1P9-201ENST00000505577 1534 ntBASIC4.63□□□□□ -1.67
CD40P25942 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 RNU6-451P-201ENST00000362921 107 ntBASIC4.63□□□□□ -1.67
CD40P25942 RNA5SP507-201ENST00000363603 121 ntBASIC4.63□□□□□ -1.67
CD40P25942 RNU1-43P-201ENST00000365052 165 ntBASIC4.63□□□□□ -1.67
CD40P25942 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CD40P25942 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 RNU6-74P-201ENST00000384235 107 ntBASIC4.63□□□□□ -1.67
CD40P25942 MIR105-1-201ENST00000385222 81 ntBASIC4.63□□□□□ -1.67
CD40P25942 DBIP1-201ENST00000401435 260 ntBASIC4.63□□□□□ -1.67
CD40P25942 AL591416.1-201ENST00000404015 867 ntBASIC4.63□□□□□ -1.67
CD40P25942 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 MTCO3P12-201ENST00000416718 547 ntBASIC4.63□□□□□ -1.67
CD40P25942 RPL21P111-201ENST00000418453 477 ntBASIC4.63□□□□□ -1.67
CD40P25942 SNRPEP10-201ENST00000420249 274 ntBASIC4.63□□□□□ -1.67
CD40P25942 FABP7P1-201ENST00000424004 391 ntBASIC4.63□□□□□ -1.67
CD40P25942 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.63□□□□□ -1.67
CD40P25942 MTND3P23-201ENST00000431980 347 ntBASIC4.63□□□□□ -1.67
CD40P25942 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 AC016691.1-201ENST00000441321 413 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 RNU7-63P-201ENST00000459054 62 ntBASIC4.63□□□□□ -1.67
CD40P25942 RNU6-261P-201ENST00000459506 102 ntBASIC4.63□□□□□ -1.67
CD40P25942 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.63□□□□□ -1.67
CD40P25942 RPS18P6-201ENST00000476880 458 ntBASIC4.63□□□□□ -1.67
CD40P25942 MTCYBP18-201ENST00000501056 747 ntBASIC4.63□□□□□ -1.67
CD40P25942 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.63□□□□□ -1.67
CD40P25942 TMEM248P1-201ENST00000510579 951 ntBASIC4.63□□□□□ -1.67
CD40P25942 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 AL671862.1-201ENST00000515851 349 ntBASIC4.63□□□□□ -1.67
CD40P25942 SNORA70.11-201ENST00000515987 138 ntBASIC4.63□□□□□ -1.67
CD40P25942 SNORA70.13-201ENST00000516116 138 ntBASIC4.63□□□□□ -1.67
CD40P25942 SNORA40.12-201ENST00000516329 111 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC011979.2-201ENST00000527568 352 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.63□□□□□ -1.67
CD40P25942 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.63□□□□□ -1.67
CD40P25942 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.63□□□□□ -1.67
CD40P25942 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.63□□□□□ -1.67
CD40P25942 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 RPL21P12-201ENST00000559810 515 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 AC105224.1-201ENST00000587055 421 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.63□□□□□ -1.67
CD40P25942 AC115621.1-201ENST00000604653 858 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC090948.1-201ENST00000607464 549 ntBASIC4.63□□□□□ -1.67
CD40P25942 AL139124.1-201ENST00000609123 421 ntBASIC4.63□□□□□ -1.67
CD40P25942 RPSAP73-201ENST00000614820 330 ntBASIC4.63□□□□□ -1.67
CD40P25942 U73479.1-201ENST00000618062 168 ntBASIC4.63□□□□□ -1.67
CD40P25942 AL136313.1-201ENST00000624804 202 ntBASIC4.63□□□□□ -1.67
CD40P25942 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 AC009951.1-201ENST00000623674 2614 ntBASIC4.63□□□□□ -1.67
CD40P25942 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 AC009962.1-201ENST00000567327 3813 ntBASIC4.63□□□□□ -1.67
CD40P25942 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.63□□□□□ -1.67
CD40P25942 AL355834.1-201ENST00000556602 3965 ntBASIC4.63□□□□□ -1.67
CD40P25942 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD40P25942 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CD40P25942 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 MTCO1P24-201ENST00000515438 1558 ntBASIC4.62□□□□□ -1.67
CD40P25942 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.62□□□□□ -1.67
CD40P25942 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CD40P25942 AP000432.2-201ENST00000624164 2048 ntBASIC4.62□□□□□ -1.67
CD40P25942 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 RPL23P2-201ENST00000320371 421 ntBASIC4.62□□□□□ -1.67
CD40P25942 U3.11-201ENST00000364476 212 ntBASIC4.62□□□□□ -1.67
CD40P25942 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD40P25942 DUTP5-201ENST00000406790 469 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms