Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC068790.5-201ENST00000602741 355 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AL109618.2-201ENST00000605527 211 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC099785.1-201ENST00000605697 437 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 SNORA62.6-201ENST00000606322 83 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC005344.1-201ENST00000613391 459 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 FP236240.3-201ENST00000623061 327 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 AC026634.1-201ENST00000634369 198 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 LINC00561-201ENST00000565815 2738 ntBASIC3.82□□□□□ -1.8
HLA-DPA1P20036 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPA1P20036 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 MTND4P34-201ENST00000572715 1371 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 RNU6-492P-201ENST00000363035 104 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 RNU1-89P-201ENST00000384592 164 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 HMGN2P8-201ENST00000391458 268 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 RPL23AP47-201ENST00000408017 460 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 BTF3P8-201ENST00000414577 526 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 MTCO3P1-205ENST00000422088 832 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC092393.1-201ENST00000439625 742 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 MTCO1P48-201ENST00000448024 1096 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 COX6CP18-201ENST00000448769 222 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 NIPA2P2-201ENST00000496376 1083 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 NPM1P41-201ENST00000512920 831 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 RNA5SP208-201ENST00000516156 78 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 SCARNA14-201ENST00000516903 136 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 RNU6-352P-201ENST00000516908 107 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC022695.1-201ENST00000522089 237 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC104417.1-201ENST00000523974 751 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC126177.3-201ENST00000551839 688 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 MTCYBP27-201ENST00000555160 670 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC122134.1-202ENST00000569111 1201 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 BRDTP1-201ENST00000605735 677 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AL583856.2-201ENST00000606298 543 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AL159169.3-201ENST00000608871 561 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC092954.1-201ENST00000609121 445 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC008083.4-201ENST00000615076 444 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 NUP58P1-201ENST00000502546 1738 ntBASIC3.81□□□□□ -1.8
HLA-DPA1P20036 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPA1P20036 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 RNA5SP424-201ENST00000390988 115 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 RNU6-712P-201ENST00000410558 100 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC092634.6-201ENST00000418558 192 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AP000949.1-201ENST00000438328 629 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 ARF4P4-201ENST00000439608 520 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 BOLA3P3-201ENST00000505182 232 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 SNORA48.10-201ENST00000516965 160 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 OR4P1P-201ENST00000530808 1136 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 HSPE1P5-201ENST00000561489 272 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC006960.3-201ENST00000561845 705 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 MIR5685-201ENST00000579080 79 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC008507.2-201ENST00000588402 1176 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms