Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC078785.3-201ENST00000476607 425 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AL049830.2-201ENST00000480072 201 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.53□□□□□ -1.84
XRCC1P18887 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.53□□□□□ -1.84
XRCC1P18887 AC119751.1-201ENST00000513357 765 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 OR8I1P-201ENST00000529291 931 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.53□□□□□ -1.84
XRCC1P18887 OR5B10P-201ENST00000532869 642 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC068339.2-201ENST00000534395 618 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 OR8K4P-201ENST00000534608 872 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 TGIF1P1-201ENST00000558095 802 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.53□□□□□ -1.84
XRCC1P18887 MTCYBP28-201ENST00000566728 1132 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 MTCO1P40-201ENST00000574371 625 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC126365.2-201ENST00000580630 379 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC006116.7-201ENST00000590141 756 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC024220.1-201ENST00000603675 484 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 U3.45-201ENST00000607547 219 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC105227.2-201ENST00000615075 605 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AL121594.5-201ENST00000631724 573 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 USP8P1-201ENST00000494673 3183 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
XRCC1P18887 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
XRCC1P18887 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
XRCC1P18887 SEPT7P7-201ENST00000420492 1301 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AL136520.1-201ENST00000600311 1322 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AC007823.1-201ENST00000569932 1566 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
XRCC1P18887 AC090337.1-201ENST00000579651 2074 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AL049781.1-201ENST00000623195 3585 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
XRCC1P18887 MIR30E-201ENST00000362104 92 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RNU5B-1-201ENST00000363286 116 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RNU6-1243P-201ENST00000364028 107 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RNU6-353P-201ENST00000364266 108 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RNA5SP167-201ENST00000365461 116 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 MTCO2P31-201ENST00000402702 684 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.52□□□□□ -1.85
XRCC1P18887 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.52□□□□□ -1.85
XRCC1P18887 AC006989.1-201ENST00000427212 131 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 YME1L1P1-201ENST00000429435 297 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 PSMA2P3-201ENST00000429685 675 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 ARF4P2-201ENST00000430209 526 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AC092641.1-201ENST00000440229 772 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RAB11AP1-201ENST00000442978 646 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.52□□□□□ -1.85
XRCC1P18887 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.52□□□□□ -1.85
XRCC1P18887 RPL21P23-201ENST00000446654 460 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 CFTRP1-201ENST00000456646 183 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 NAP1L1P3-201ENST00000462291 880 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 PRDX3P4-201ENST00000470828 747 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
XRCC1P18887 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.52□□□□□ -1.85
XRCC1P18887 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.52□□□□□ -1.85
XRCC1P18887 NAMPTP2-201ENST00000505629 1115 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.52□□□□□ -1.85
XRCC1P18887 AC118282.2-201ENST00000508739 374 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.52□□□□□ -1.85
XRCC1P18887 AC112198.4-201ENST00000515450 351 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RN7SKP13-201ENST00000515933 244 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 RNU6-202P-201ENST00000515998 96 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.52□□□□□ -1.85
XRCC1P18887 AP000619.3-201ENST00000535634 1127 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.52□□□□□ -1.85
XRCC1P18887 CYB5AP5-201ENST00000549779 389 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 EIF5A2P1-201ENST00000564027 460 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 MIR4504-201ENST00000577413 92 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 MIR3922-201ENST00000585192 84 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.52□□□□□ -1.85
XRCC1P18887 AC006116.10-201ENST00000591836 581 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 DNAJC19P3-201ENST00000594491 331 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 MIR7851-201ENST00000610611 160 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AC015967.1-201ENST00000619893 476 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 AC243312.2-201ENST00000623340 601 ntBASIC3.52□□□□□ -1.85
XRCC1P18887 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.52□□□□□ -1.85
XRCC1P18887 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
XRCC1P18887 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
XRCC1P18887 DCAF13P1-201ENST00000495256 1330 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AL365440.1-201ENST00000436135 2167 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.51□□□□□ -1.85
XRCC1P18887 RNU6-444P-201ENST00000383988 108 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.51□□□□□ -1.85
XRCC1P18887 RNA5SP44-201ENST00000410446 133 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 RNU6-55P-201ENST00000411092 107 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 RNU6-954P-201ENST00000411355 107 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 RPS3AP25-201ENST00000411660 793 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC069218.2-201ENST00000411665 344 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 RPL31P2-201ENST00000413849 377 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC093578.1-201ENST00000415219 368 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 LIPT1P1-201ENST00000415870 1186 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC233981.1-201ENST00000423224 461 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 USP9YP31-201ENST00000431405 881 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms