Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.03□□□□□ -1.6
ATF4P18848 MAPK10-349ENST00000641767 3661 ntBASIC5.03□□□□□ -1.6
ATF4P18848 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ATF4P18848 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 AC103710.2-202ENST00000641454 2853 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC010894.1-201ENST00000313760 361 ntBASIC5.02□□□□□ -1.61
ATF4P18848 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATF4P18848 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.02□□□□□ -1.61
ATF4P18848 Y_RNA.166-201ENST00000363730 102 ntBASIC5.02□□□□□ -1.61
ATF4P18848 RNU6-694P-201ENST00000364071 147 ntBASIC5.02□□□□□ -1.61
ATF4P18848 Y_RNA.356-201ENST00000365475 113 ntBASIC5.02□□□□□ -1.61
ATF4P18848 SNORA70.6-201ENST00000383934 134 ntBASIC5.02□□□□□ -1.61
ATF4P18848 SNORA32.2-201ENST00000384049 122 ntBASIC5.02□□□□□ -1.61
ATF4P18848 RNU6-629P-201ENST00000384061 103 ntBASIC5.02□□□□□ -1.61
ATF4P18848 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATF4P18848 UBBP1-201ENST00000392399 473 ntBASIC5.02□□□□□ -1.61
ATF4P18848 RN7SKP146-201ENST00000410242 334 ntBASIC5.02□□□□□ -1.61
ATF4P18848 RNA5SP345-201ENST00000410646 108 ntBASIC5.02□□□□□ -1.61
ATF4P18848 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 AL929472.1-201ENST00000417484 429 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 MTATP6P4-201ENST00000427725 675 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.02□□□□□ -1.61
ATF4P18848 RPEP4-201ENST00000437636 602 ntBASIC5.02□□□□□ -1.61
ATF4P18848 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 NEFMP1-201ENST00000443423 1006 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AL118520.1-201ENST00000450770 291 ntBASIC5.02□□□□□ -1.61
ATF4P18848 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 AL034369.1-201ENST00000453808 477 ntBASIC5.02□□□□□ -1.61
ATF4P18848 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 RN7SL83P-201ENST00000468131 297 ntBASIC5.02□□□□□ -1.61
ATF4P18848 TRBV1-201ENST00000476502 284 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC092349.1-201ENST00000504903 310 ntBASIC5.02□□□□□ -1.61
ATF4P18848 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 GLUD1P3-202ENST00000508551 200 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC093878.1-201ENST00000515630 432 ntBASIC5.02□□□□□ -1.61
ATF4P18848 SNORA31.22-201ENST00000517204 135 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF4P18848 PSMA2P1-201ENST00000526365 646 ntBASIC5.02□□□□□ -1.61
ATF4P18848 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.02□□□□□ -1.61
ATF4P18848 AC078814.3-201ENST00000553036 491 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.02□□□□□ -1.61
ATF4P18848 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.02□□□□□ -1.61
ATF4P18848 MIR3157-201ENST00000578688 85 ntBASIC5.02□□□□□ -1.61
ATF4P18848 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 BDH2P1-201ENST00000602288 736 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 AC104763.2-201ENST00000604179 382 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC004696.1-201ENST00000614345 607 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AC005858.3-201ENST00000624756 589 ntBASIC5.02□□□□□ -1.61
ATF4P18848 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
ATF4P18848 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF4P18848 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
ATF4P18848 AC009812.4-201ENST00000569134 1805 ntBASIC5.02□□□□□ -1.61
ATF4P18848 AP001642.1-201ENST00000624727 2117 ntBASIC5.02□□□□□ -1.61
ATF4P18848 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.01□□□□□ -1.61
ATF4P18848 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
ATF4P18848 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATF4P18848 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATF4P18848 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.01□□□□□ -1.61
ATF4P18848 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
ATF4P18848 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.01□□□□□ -1.61
ATF4P18848 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ATF4P18848 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
ATF4P18848 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ATF4P18848 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 Y_RNA.100-201ENST00000363141 102 ntBASIC5.01□□□□□ -1.61
ATF4P18848 RNA5SP152-201ENST00000365184 110 ntBASIC5.01□□□□□ -1.61
ATF4P18848 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.01□□□□□ -1.61
ATF4P18848 MIR514A2-201ENST00000385131 88 ntBASIC5.01□□□□□ -1.61
ATF4P18848 MIR514A3-201ENST00000385132 88 ntBASIC5.01□□□□□ -1.61
ATF4P18848 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATF4P18848 HSPD1P16-201ENST00000402302 394 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms