Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNA5SP31-201ENST00000411144 127 ntBASIC3.87□□□□□ -1.79
TOP1P11387 RPS7P13-201ENST00000413955 498 ntBASIC3.87□□□□□ -1.79
TOP1P11387 RPS15AP6-201ENST00000420703 385 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.87□□□□□ -1.79
TOP1P11387 AC005517.2-201ENST00000424673 553 ntBASIC3.87□□□□□ -1.79
TOP1P11387 RPL23AP82-202ENST00000427528 469 ntBASIC3.87□□□□□ -1.79
TOP1P11387 Z75741.1-201ENST00000446793 314 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.87□□□□□ -1.79
TOP1P11387 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 CENPBD1P1-201ENST00000464061 469 ntBASIC3.87□□□□□ -1.79
TOP1P11387 VN1R17P-201ENST00000472048 1090 ntBASIC3.87□□□□□ -1.79
TOP1P11387 CAB39P1-201ENST00000502277 460 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.87□□□□□ -1.79
TOP1P11387 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.87□□□□□ -1.79
TOP1P11387 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TOP1P11387 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.87□□□□□ -1.79
TOP1P11387 HIGD1AP10-201ENST00000527837 282 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.87□□□□□ -1.79
TOP1P11387 AC010735.1-201ENST00000567305 1026 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 AC008507.1-201ENST00000587506 734 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 AL606834.2-201ENST00000602954 668 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AL161756.2-201ENST00000604597 246 ntBASIC3.87□□□□□ -1.79
TOP1P11387 YPEL5P2-201ENST00000605553 359 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC073657.2-201ENST00000605661 303 ntBASIC3.87□□□□□ -1.79
TOP1P11387 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 AL354696.1-201ENST00000614652 497 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC009464.1-201ENST00000615731 469 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AC003001.2-201ENST00000616294 831 ntBASIC3.87□□□□□ -1.79
TOP1P11387 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TOP1P11387 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TOP1P11387 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TOP1P11387 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TOP1P11387 PABPC1P7-201ENST00000413177 1513 ntBASIC3.86□□□□□ -1.79
TOP1P11387 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 RNU6-761P-201ENST00000384148 107 ntBASIC3.86□□□□□ -1.79
TOP1P11387 SKINT1L-201ENST00000401057 817 ntBASIC3.86□□□□□ -1.79
TOP1P11387 MTCO3P31-201ENST00000405526 789 ntBASIC3.86□□□□□ -1.79
TOP1P11387 XKRYP4-201ENST00000414395 483 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AL356968.1-201ENST00000416622 474 ntBASIC3.86□□□□□ -1.79
TOP1P11387 MTCYBP24-201ENST00000420387 1106 ntBASIC3.86□□□□□ -1.79
TOP1P11387 FAR1P1-201ENST00000427163 934 ntBASIC3.86□□□□□ -1.79
TOP1P11387 UBE2V1P1-201ENST00000430836 445 ntBASIC3.86□□□□□ -1.79
TOP1P11387 USP9YP31-201ENST00000431405 881 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP1P11387 TRIM60P13-201ENST00000432350 1283 ntBASIC3.86□□□□□ -1.79
TOP1P11387 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 SETP5-201ENST00000437270 562 ntBASIC3.86□□□□□ -1.79
TOP1P11387 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP1P11387 RPS3AP12-201ENST00000443616 753 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AC017099.1-201ENST00000448261 1028 ntBASIC3.86□□□□□ -1.79
TOP1P11387 XKRYP5-201ENST00000449659 483 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP1P11387 NF1P3-201ENST00000457709 450 ntBASIC3.86□□□□□ -1.79
TOP1P11387 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP1P11387 RPL5P24-201ENST00000463742 885 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AC021205.2-201ENST00000480069 347 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AL049830.2-201ENST00000480072 201 ntBASIC3.86□□□□□ -1.79
TOP1P11387 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP1P11387 AC110794.1-201ENST00000505816 425 ntBASIC3.86□□□□□ -1.79
TOP1P11387 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.86□□□□□ -1.79
TOP1P11387 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP1P11387 AC010306.1-201ENST00000523223 1117 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP1P11387 HIGD1AP1-201ENST00000550979 275 ntBASIC3.86□□□□□ -1.79
TOP1P11387 RPL21P12-201ENST00000559810 515 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP1P11387 AC090312.2-201ENST00000582687 378 ntBASIC3.86□□□□□ -1.79
TOP1P11387 YWHAQP7-201ENST00000603536 658 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AC079880.2-201ENST00000603790 1213 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP1P11387 AC011468.4-201ENST00000603942 409 ntBASIC3.86□□□□□ -1.79
TOP1P11387 AC015849.2-201ENST00000605738 409 ntBASIC3.86□□□□□ -1.79
TOP1P11387 U73479.1-201ENST00000618062 168 ntBASIC3.86□□□□□ -1.79
TOP1P11387 SNORD39.4-201ENST00000620099 78 ntBASIC3.86□□□□□ -1.79
TOP1P11387 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 MIR3651-201ENST00000630427 90 ntBASIC3.86□□□□□ -1.79
TOP1P11387 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP1P11387 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP1P11387 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TOP1P11387 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP1P11387 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP1P11387 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.85□□□□□ -1.79
TOP1P11387 AL589826.1-201ENST00000340697 249 ntBASIC3.85□□□□□ -1.79
TOP1P11387 RNU6-600P-201ENST00000362524 99 ntBASIC3.85□□□□□ -1.79
TOP1P11387 RNU1-70P-201ENST00000362618 164 ntBASIC3.85□□□□□ -1.79
TOP1P11387 RNU6-335P-201ENST00000364563 113 ntBASIC3.85□□□□□ -1.79
TOP1P11387 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP1P11387 SNORA9-201ENST00000384215 133 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AL357075.1-201ENST00000404107 726 ntBASIC3.85□□□□□ -1.79
TOP1P11387 RNA5SP107-201ENST00000411358 122 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AC069218.2-201ENST00000411665 344 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms