Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
FREM3P0C091 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
FREM3P0C091 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.56□□□□□ -2
FREM3P0C091 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.56□□□□□ -2
FREM3P0C091 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.56□□□□□ -2
FREM3P0C091 AC069277.2-201ENST00000454211 432 ntBASIC2.56□□□□□ -2
FREM3P0C091 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.56□□□□□ -2
FREM3P0C091 AC021205.1-201ENST00000468797 348 ntBASIC2.56□□□□□ -2
FREM3P0C091 AC078817.1-201ENST00000492623 435 ntBASIC2.56□□□□□ -2
FREM3P0C091 AP002404.1-201ENST00000532005 451 ntBASIC2.56□□□□□ -2
FREM3P0C091 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.56□□□□□ -2
FREM3P0C091 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.56□□□□□ -2
FREM3P0C091 AL096803.3-201ENST00000609032 532 ntBASIC2.56□□□□□ -2
FREM3P0C091 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
FREM3P0C091 AC008264.2-201ENST00000610193 3731 ntBASIC2.55□□□□□ -2
FREM3P0C091 AL118496.1-201ENST00000440201 1812 ntBASIC2.55□□□□□ -2
FREM3P0C091 AC004944.1-201ENST00000517807 3059 ntBASIC2.55□□□□□ -2
FREM3P0C091 Y_RNA.62-201ENST00000362840 99 ntBASIC2.55□□□□□ -2
FREM3P0C091 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.55□□□□□ -2
FREM3P0C091 AL139281.1-201ENST00000422120 335 ntBASIC2.55□□□□□ -2
FREM3P0C091 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.55□□□□□ -2
FREM3P0C091 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.55□□□□□ -2
FREM3P0C091 RPL7P31-201ENST00000450192 724 ntBASIC2.55□□□□□ -2
FREM3P0C091 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.55□□□□□ -2
FREM3P0C091 AC027309.2-201ENST00000520566 192 ntBASIC2.55□□□□□ -2
FREM3P0C091 AC096644.4-201ENST00000563417 2912 ntBASIC2.55□□□□□ -2
FREM3P0C091 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.55□□□□□ -2
FREM3P0C091 AC145207.9-201ENST00000623802 325 ntBASIC2.55□□□□□ -2
FREM3P0C091 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.55□□□□□ -2
FREM3P0C091 AL136964.1-201ENST00000622038 2990 ntBASIC2.55□□□□□ -2
FREM3P0C091 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
FREM3P0C091 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FREM3P0C091 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
FREM3P0C091 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
FREM3P0C091 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.54□□□□□ -2
FREM3P0C091 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
FREM3P0C091 VN1R51P-201ENST00000411675 945 ntBASIC2.54□□□□□ -2
FREM3P0C091 CACYBPP2-201ENST00000453625 678 ntBASIC2.54□□□□□ -2
FREM3P0C091 AC126389.1-201ENST00000477436 290 ntBASIC2.54□□□□□ -2
FREM3P0C091 RPL5P23-201ENST00000496040 868 ntBASIC2.54□□□□□ -2
FREM3P0C091 HAUS1P1-201ENST00000505275 832 ntBASIC2.54□□□□□ -2
FREM3P0C091 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.54□□□□□ -2
FREM3P0C091 AC005921.1-201ENST00000510589 286 ntBASIC2.54□□□□□ -2
FREM3P0C091 AC087276.1-201ENST00000529659 480 ntBASIC2.54□□□□□ -2
FREM3P0C091 OR4C2P-201ENST00000530855 1064 ntBASIC2.54□□□□□ -2
FREM3P0C091 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.54□□□□□ -2
FREM3P0C091 H3F3AP1-201ENST00000559984 334 ntBASIC2.54□□□□□ -2
FREM3P0C091 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.54□□□□□ -2
FREM3P0C091 MIR4513-201ENST00000581077 86 ntBASIC2.54□□□□□ -2
FREM3P0C091 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.54□□□□□ -2
FREM3P0C091 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.54□□□□□ -2
FREM3P0C091 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.54□□□□□ -2
FREM3P0C091 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.54□□□□□ -2
FREM3P0C091 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FREM3P0C091 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.54□□□□□ -2
FREM3P0C091 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.54□□□□□ -2
FREM3P0C091 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FREM3P0C091 U3.15-201ENST00000365398 212 ntBASIC2.54□□□□□ -2
FREM3P0C091 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.54□□□□□ -2
FREM3P0C091 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
FREM3P0C091 RNU6-233P-201ENST00000410845 141 ntBASIC2.54□□□□□ -2
FREM3P0C091 AC069218.2-201ENST00000411665 344 ntBASIC2.54□□□□□ -2
FREM3P0C091 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.54□□□□□ -2
FREM3P0C091 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.54□□□□□ -2
FREM3P0C091 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.54□□□□□ -2
FREM3P0C091 MTCO1P52-201ENST00000433928 531 ntBASIC2.54□□□□□ -2
FREM3P0C091 HMGB1P5-202ENST00000451497 985 ntBASIC2.54□□□□□ -2
FREM3P0C091 EIF2S2P4-201ENST00000461070 984 ntBASIC2.54□□□□□ -2
FREM3P0C091 NPM1P52-201ENST00000518264 846 ntBASIC2.54□□□□□ -2
FREM3P0C091 MIR4458-201ENST00000578872 75 ntBASIC2.54□□□□□ -2
FREM3P0C091 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.54□□□□□ -2
FREM3P0C091 AL161912.3-201ENST00000605404 628 ntBASIC2.54□□□□□ -2
FREM3P0C091 AC012213.4-201ENST00000606457 354 ntBASIC2.54□□□□□ -2
FREM3P0C091 AL590240.3-201ENST00000621416 943 ntBASIC2.54□□□□□ -2
FREM3P0C091 AL359757.2-201ENST00000624309 274 ntBASIC2.54□□□□□ -2
FREM3P0C091 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
FREM3P0C091 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
FREM3P0C091 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
FREM3P0C091 MIR449A-201ENST00000362113 91 ntBASIC2.53□□□□□ -2
FREM3P0C091 SNORA70E-201ENST00000384492 135 ntBASIC2.53□□□□□ -2
FREM3P0C091 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
FREM3P0C091 AC004987.3-201ENST00000413879 771 ntBASIC2.53□□□□□ -2
FREM3P0C091 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.53□□□□□ -2
FREM3P0C091 AL160175.1-201ENST00000428124 247 ntBASIC2.53□□□□□ -2
FREM3P0C091 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.53□□□□□ -2
FREM3P0C091 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.53□□□□□ -2
FREM3P0C091 NECAP1P2-201ENST00000455668 727 ntBASIC2.53□□□□□ -2
FREM3P0C091 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
FREM3P0C091 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
FREM3P0C091 AC114982.2-201ENST00000461396 358 ntBASIC2.53□□□□□ -2
FREM3P0C091 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.53□□□□□ -2
FREM3P0C091 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.53□□□□□ -2
FREM3P0C091 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.53□□□□□ -2
FREM3P0C091 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.53□□□□□ -2
FREM3P0C091 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.53□□□□□ -2
FREM3P0C091 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.53□□□□□ -2
FREM3P0C091 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.53□□□□□ -2
FREM3P0C091 AC025125.1-201ENST00000624743 1922 ntBASIC2.53□□□□□ -2
FREM3P0C091 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.53□□□□□ -2
FREM3P0C091 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms