Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TPM1P09493 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TPM1P09493 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM1P09493 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TPM1P09493 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TPM1P09493 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM1P09493 MIR141-201ENST00000384975 95 ntBASIC3.5□□□□□ -1.85
TPM1P09493 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TPM1P09493 AL512504.1-201ENST00000415494 778 ntBASIC3.5□□□□□ -1.85
TPM1P09493 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM1P09493 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TPM1P09493 RPS7P2-201ENST00000435134 607 ntBASIC3.5□□□□□ -1.85
TPM1P09493 AC092641.1-201ENST00000440229 772 ntBASIC3.5□□□□□ -1.85
TPM1P09493 HSPE1P28-201ENST00000443139 211 ntBASIC3.5□□□□□ -1.85
TPM1P09493 RBMY2UP-201ENST00000453474 324 ntBASIC3.5□□□□□ -1.85
TPM1P09493 HMGN2P13-201ENST00000476476 274 ntBASIC3.5□□□□□ -1.85
TPM1P09493 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.5□□□□□ -1.85
TPM1P09493 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.5□□□□□ -1.85
TPM1P09493 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM1P09493 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM1P09493 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM1P09493 AC107954.1-201ENST00000565906 727 ntBASIC3.5□□□□□ -1.85
TPM1P09493 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM1P09493 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.5□□□□□ -1.85
TPM1P09493 MIR4276-201ENST00000584832 70 ntBASIC3.5□□□□□ -1.85
TPM1P09493 AC243312.2-201ENST00000623340 601 ntBASIC3.5□□□□□ -1.85
TPM1P09493 AC006963.1-201ENST00000624003 1052 ntBASIC3.5□□□□□ -1.85
TPM1P09493 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TPM1P09493 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM1P09493 AL359893.1-201ENST00000447628 1580 ntBASIC3.5□□□□□ -1.85
TPM1P09493 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TPM1P09493 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TPM1P09493 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM1P09493 AC110774.1-201ENST00000623567 2018 ntBASIC3.49□□□□□ -1.85
TPM1P09493 AL512646.1-201ENST00000269395 1077 ntBASIC3.49□□□□□ -1.85
TPM1P09493 MIR142-201ENST00000384835 87 ntBASIC3.49□□□□□ -1.85
TPM1P09493 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM1P09493 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.49□□□□□ -1.85
TPM1P09493 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TPM1P09493 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.49□□□□□ -1.85
TPM1P09493 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.49□□□□□ -1.85
TPM1P09493 ACTR3P3-201ENST00000480448 893 ntBASIC3.49□□□□□ -1.85
TPM1P09493 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.49□□□□□ -1.85
TPM1P09493 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM1P09493 SNORA31.13-201ENST00000516624 135 ntBASIC3.49□□□□□ -1.85
TPM1P09493 RNU6-889P-201ENST00000517189 103 ntBASIC3.49□□□□□ -1.85
TPM1P09493 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM1P09493 HIGD1AP1-201ENST00000550979 275 ntBASIC3.49□□□□□ -1.85
TPM1P09493 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
TPM1P09493 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.49□□□□□ -1.85
TPM1P09493 AC136624.4-201ENST00000573044 370 ntBASIC3.49□□□□□ -1.85
TPM1P09493 OR4G1P-201ENST00000588632 938 ntBASIC3.49□□□□□ -1.85
TPM1P09493 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.49□□□□□ -1.85
TPM1P09493 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TPM1P09493 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TPM1P09493 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.49□□□□□ -1.85
TPM1P09493 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TPM1P09493 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM1P09493 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TPM1P09493 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
TPM1P09493 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 RN7SKP227-201ENST00000364445 330 ntBASIC3.48□□□□□ -1.85
TPM1P09493 U8.9-201ENST00000365667 134 ntBASIC3.48□□□□□ -1.85
TPM1P09493 OR52E6-202ENST00000379946 954 ntBASIC3.48□□□□□ -1.85
TPM1P09493 MIR218-2-201ENST00000385006 110 ntBASIC3.48□□□□□ -1.85
TPM1P09493 RN7SKP263-201ENST00000411194 309 ntBASIC3.48□□□□□ -1.85
TPM1P09493 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM1P09493 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM1P09493 AL513175.1-201ENST00000431492 780 ntBASIC3.48□□□□□ -1.85
TPM1P09493 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM1P09493 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM1P09493 RPL21P23-201ENST00000446654 460 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AL035407.2-201ENST00000454090 378 ntBASIC3.48□□□□□ -1.85
TPM1P09493 snoU13.3-201ENST00000459441 104 ntBASIC3.48□□□□□ -1.85
TPM1P09493 RPL7P15-201ENST00000461190 712 ntBASIC3.48□□□□□ -1.85
TPM1P09493 RPL7P38-201ENST00000488396 739 ntBASIC3.48□□□□□ -1.85
TPM1P09493 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM1P09493 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.48□□□□□ -1.85
TPM1P09493 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM1P09493 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
TPM1P09493 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
TPM1P09493 RNA5SP468-201ENST00000516782 93 ntBASIC3.48□□□□□ -1.85
TPM1P09493 HMGB1P23-201ENST00000518743 568 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 GTF2IP22-201ENST00000554443 182 ntBASIC3.48□□□□□ -1.85
TPM1P09493 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 AL157394.1-201ENST00000562983 1224 ntBASIC3.48□□□□□ -1.85
TPM1P09493 MTCYBP28-201ENST00000566728 1132 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 AC078899.3-201ENST00000599065 212 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AL133393.1-201ENST00000603277 287 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AC022387.2-201ENST00000604050 448 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AC073657.2-201ENST00000605661 303 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AC242628.1-201ENST00000606810 391 ntBASIC3.48□□□□□ -1.85
TPM1P09493 AC092354.2-201ENST00000607786 514 ntBASIC3.48□□□□□ -1.85
TPM1P09493 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM1P09493 MIR378J-201ENST00000611988 109 ntBASIC3.48□□□□□ -1.85
TPM1P09493 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms