Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQB2P05538 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
HLA-DQB2P05538 MTND5P27-201ENST00000428871 1720 ntBASIC2.96□□□□□ -1.93
HLA-DQB2P05538 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
HLA-DQB2P05538 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC000403.1-201ENST00000613696 3585 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 RNU6-386P-201ENST00000362650 107 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 RN7SKP58-201ENST00000411010 305 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 RPL31P45-201ENST00000419532 356 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AL031663.1-201ENST00000437445 219 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 RPS3AP12-201ENST00000443616 753 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 RPS20P32-201ENST00000456044 356 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 RPS29P26-201ENST00000477483 171 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC092185.1-201ENST00000491371 97 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC026427.2-201ENST00000506228 536 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC108120.2-201ENST00000512973 294 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 H3F3AP1-201ENST00000559984 334 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC074050.1-201ENST00000563247 211 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC034105.3-201ENST00000565294 442 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC105429.2-201ENST00000610567 517 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 MIR4278-201ENST00000636094 69 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC138915.3-201ENST00000562908 1389 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC123912.3-201ENST00000600907 1367 ntBASIC2.96□□□□□ -1.94
HLA-DQB2P05538 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQB2P05538 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 RNU6-317P-201ENST00000384031 107 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 SNORA9-201ENST00000384215 133 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 RNU6-185P-201ENST00000384421 107 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 MIR491-201ENST00000384877 84 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 RPL35AP12-201ENST00000425362 338 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AL031736.2-201ENST00000426573 787 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 ELOCP6-201ENST00000429066 328 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 Z99127.2-201ENST00000441426 334 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 HMGB1P26-201ENST00000452520 628 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 ELOCP12-201ENST00000458706 328 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 RPL5P24-201ENST00000463742 885 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 RPL37P6-202ENST00000464216 403 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AC017007.3-201ENST00000479865 435 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AC078817.1-201ENST00000492623 435 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AC010374.2-201ENST00000512933 535 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AC115085.1-201ENST00000588924 229 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AC022509.4-201ENST00000621404 572 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AL590240.3-201ENST00000621416 943 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 AC009039.2-201ENST00000624524 529 ntBASIC2.95□□□□□ -1.94
HLA-DQB2P05538 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQB2P05538 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 GTF2H2B-203ENST00000508065 1432 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 SNORA48.5-201ENST00000391143 135 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC022018.1-201ENST00000430685 241 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 ELOCP11-201ENST00000436690 332 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC093156.1-201ENST00000440382 670 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 ELOCP16-201ENST00000444494 332 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 HMGN2P21-201ENST00000447764 270 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC112492.1-201ENST00000449607 712 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 HMGN1P8-201ENST00000463578 288 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 RPL21P103-201ENST00000479921 488 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC118282.1-201ENST00000506408 765 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC119751.1-201ENST00000513357 765 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQB2P05538 AL845331.3-202ENST00000562856 261 ntBASIC2.94□□□□□ -1.94
HLA-DQB2P05538 ZNF192P1-203ENST00000565888 810 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms