Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FAM157B-203ENST00000639350 358 ntBASIC2.99□□□□□ -1.93
HLA-DPB1P04440 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPB1P04440 AC107081.3-201ENST00000612715 2034 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AL365440.1-201ENST00000436135 2167 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AC066616.2-201ENST00000559334 1481 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 MIR218-2-201ENST00000385006 110 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 RNU6-328P-201ENST00000390887 106 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 ATP5F1P3-201ENST00000397213 657 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 DSTNP4-201ENST00000399472 474 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 RNU6-77P-201ENST00000410554 91 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 RNU6-272P-201ENST00000411028 104 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 CRYBB2P1-203ENST00000415709 538 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 RPL31P45-201ENST00000419532 356 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 OR2AS1P-201ENST00000427827 319 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 HMGN2P31-201ENST00000432430 273 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 USP9YP7-201ENST00000436723 430 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 CST9LP2-201ENST00000437612 320 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 MOB1AP2-201ENST00000446060 614 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AL096829.2-201ENST00000446582 742 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 USP9YP32-201ENST00000452432 430 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 BX248409.1-201ENST00000455497 255 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 U3.44-201ENST00000458938 192 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 PRDX3P4-201ENST00000470828 747 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 ST13P14-201ENST00000474095 734 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 HIGD1AP3-201ENST00000515857 278 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 SNORA67.7-201ENST00000516664 135 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 IGKV2-23-201ENST00000518729 323 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AC113192.3-201ENST00000529152 742 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AC103843.2-201ENST00000530523 682 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 MIR3158-1-201ENST00000583596 81 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 YWHAQP7-201ENST00000603536 658 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 LLPHP1-201ENST00000603571 367 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPB1P04440 ZNF33CP-201ENST00000432492 2030 ntBASIC2.98□□□□□ -1.93
HLA-DPB1P04440 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 U3.6-201ENST00000363622 211 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 BX842559.1-201ENST00000419615 532 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC246680.2-201ENST00000422106 389 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 CYCSP4-201ENST00000429682 331 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC115115.1-201ENST00000449927 248 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 PPIAP3-201ENST00000450588 505 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 RPS15AP1-201ENST00000457423 391 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 RN7SL283P-201ENST00000489055 303 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC112198.1-201ENST00000505369 1220 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 Vault.1-201ENST00000516474 102 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 SCARNA20.6-201ENST00000517251 106 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 OR5B10P-201ENST00000532869 642 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 MIR1254-2-201ENST00000579553 63 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC067852.3-201ENST00000589177 561 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 VN1R88P-201ENST00000596787 292 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC133794.1-201ENST00000602731 914 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AL020997.3-201ENST00000602843 359 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC112503.2-201ENST00000609005 552 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AL591516.1-201ENST00000611326 274 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AC243312.2-201ENST00000623340 601 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 AL645937.1-201ENST00000641739 1652 ntBASIC2.97□□□□□ -1.93
HLA-DPB1P04440 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DPB1P04440 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HLA-DPB1P04440 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC025125.1-201ENST00000624743 1922 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 RNU6-354P-201ENST00000383862 107 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms