Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 RNU1-94P-201ENST00000362627 173 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 SNRPEP2-201ENST00000397592 279 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AL080315.1-201ENST00000406055 466 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 MIR1250-201ENST00000408098 113 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 USP9YP33-201ENST00000412220 421 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 VDAC1P9-201ENST00000412766 841 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 AL593851.1-201ENST00000426171 157 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 USP9YP35-201ENST00000435696 412 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 UBE2V1P7-201ENST00000446395 340 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC073587.1-201ENST00000447093 876 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AP000936.2-201ENST00000447151 681 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 AC026410.2-201ENST00000460281 156 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC146507.1-201ENST00000468335 354 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM38O00635 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM38O00635 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 AC113430.1-201ENST00000506872 718 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 RNA5SP216-201ENST00000516111 123 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 RNU6-232P-201ENST00000517144 64 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 AC092851.1-201ENST00000535964 478 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 AC093249.4-201ENST00000564755 259 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 RN7SL652P-201ENST00000577769 300 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM38O00635 AC006539.2-201ENST00000601729 572 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC020910.2-201ENST00000603635 610 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AL136363.2-201ENST00000604173 851 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM38O00635 AP002360.3-201ENST00000607673 710 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC108747.1-201ENST00000609508 535 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AL158063.1-201ENST00000615349 536 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC099669.2-201ENST00000616549 437 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC009318.4-201ENST00000620496 486 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 BMS1P21-201ENST00000634565 365 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 CR848007.1-201ENST00000442354 1699 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
TRIM38O00635 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TRIM38O00635 MTND5P24-201ENST00000438892 1767 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
TRIM38O00635 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM38O00635 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM38O00635 MTCO1P24-201ENST00000515438 1558 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM38O00635 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM38O00635 FAM91A3P-201ENST00000456826 2544 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 RNA5SP479-201ENST00000364858 117 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 Y_RNA.517-201ENST00000384551 106 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 Y_RNA.553-201ENST00000384670 102 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 RPS24P12-201ENST00000402084 394 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC140479.3-201ENST00000418944 1126 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 RPL31P45-201ENST00000419532 356 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 UQCRBP1-201ENST00000421129 336 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AL953862.1-201ENST00000423016 168 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AL049610.1-201ENST00000423374 372 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM38O00635 RPL23AP74-201ENST00000437246 471 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM38O00635 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM38O00635 AC104651.2-201ENST00000447549 528 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 DDX39BP2-208ENST00000453923 258 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 MTCYBP1-201ENST00000454315 1119 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM38O00635 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 BZW1P2-201ENST00000473537 826 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 RN7SL41P-201ENST00000476144 297 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC011825.1-201ENST00000484967 388 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM38O00635 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM38O00635 MTCYBP17-201ENST00000503579 789 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC093281.2-201ENST00000510153 597 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC026412.2-201ENST00000512270 1075 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM38O00635 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 RNU6-709P-201ENST00000517257 104 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AF186190.1-201ENST00000517470 480 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM38O00635 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms