Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SOX1O00570 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SOX1O00570 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 AL731532.1-201ENST00000623972 4236 ntBASIC5.78□□□□□ -1.48
SOX1O00570 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX1O00570 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX1O00570 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SOX1O00570 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SOX1O00570 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX1O00570 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 AC139713.2-214ENST00000642059 1811 ntBASIC5.77□□□□□ -1.49
SOX1O00570 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX1O00570 RN7SKP44-201ENST00000363602 316 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AL359634.1-202ENST00000404721 284 ntBASIC5.77□□□□□ -1.49
SOX1O00570 MTND4LP17-201ENST00000414607 293 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX1O00570 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX1O00570 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX1O00570 RPS20P5-201ENST00000434808 360 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX1O00570 AL359073.1-201ENST00000448036 403 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AL590639.1-201ENST00000456484 337 ntBASIC5.77□□□□□ -1.49
SOX1O00570 RNU7-152P-201ENST00000458982 64 ntBASIC5.77□□□□□ -1.49
SOX1O00570 Y_RNA.635-201ENST00000459041 101 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AC091885.1-201ENST00000506658 268 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX1O00570 COX6B1P5-201ENST00000509843 249 ntBASIC5.77□□□□□ -1.49
SOX1O00570 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.77□□□□□ -1.49
SOX1O00570 RN7SKP92-201ENST00000517266 244 ntBASIC5.77□□□□□ -1.49
SOX1O00570 IGKV2-23-201ENST00000518729 323 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX1O00570 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX1O00570 MIR3667-201ENST00000581025 74 ntBASIC5.77□□□□□ -1.49
SOX1O00570 MIR4715-201ENST00000584117 79 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AC019193.3-201ENST00000609144 554 ntBASIC5.77□□□□□ -1.49
SOX1O00570 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX1O00570 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX1O00570 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX1O00570 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SOX1O00570 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX1O00570 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX1O00570 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX1O00570 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SOX1O00570 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SOX1O00570 AP004289.2-201ENST00000444413 1457 ntBASIC5.77□□□□□ -1.49
SOX1O00570 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
SOX1O00570 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SOX1O00570 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SOX1O00570 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX1O00570 AC107081.3-201ENST00000612715 2034 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 AC011155.1-201ENST00000316512 456 ntBASIC5.76□□□□□ -1.49
SOX1O00570 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX1O00570 RNU6-28P-201ENST00000362378 107 ntBASIC5.76□□□□□ -1.49
SOX1O00570 Y_RNA.197-201ENST00000364004 102 ntBASIC5.76□□□□□ -1.49
SOX1O00570 Y_RNA.301-201ENST00000364990 103 ntBASIC5.76□□□□□ -1.49
SOX1O00570 Y_RNA.401-201ENST00000383965 117 ntBASIC5.76□□□□□ -1.49
SOX1O00570 RNY4P36-201ENST00000391116 96 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AL356057.3-201ENST00000402607 340 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AC096632.1-201ENST00000427395 310 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX1O00570 USP24P1-201ENST00000433802 779 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AC093156.1-201ENST00000440382 670 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AC112498.1-201ENST00000444401 332 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX1O00570 AC020593.1-201ENST00000507399 299 ntBASIC5.76□□□□□ -1.49
SOX1O00570 FAM206BP-201ENST00000510179 541 ntBASIC5.76□□□□□ -1.49
SOX1O00570 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX1O00570 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.76□□□□□ -1.49
SOX1O00570 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX1O00570 AP001029.3-201ENST00000588063 596 ntBASIC5.76□□□□□ -1.49
SOX1O00570 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX1O00570 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX1O00570 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SOX1O00570 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX1O00570 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX1O00570 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SOX1O00570 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SOX1O00570 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SOX1O00570 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SOX1O00570 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms