Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL512637.2-201ENST00000431287 1256 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC091862.1-201ENST00000438016 1100 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 SNRPGP3-201ENST00000469405 227 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 HMGB1P21-201ENST00000502313 581 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTCO1P30-201ENST00000515244 580 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 Vault.1-201ENST00000516474 102 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 CIR1P1-201ENST00000524055 1133 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 OR4R3P-201ENST00000525084 838 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC004024.1-201ENST00000549244 247 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 BNIP3P38-201ENST00000601117 544 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 SUMO2P14-201ENST00000604488 293 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC010680.4-201ENST00000605334 543 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC073657.2-201ENST00000605661 303 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 MIR8084-201ENST00000614105 89 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 SRP72P2-201ENST00000344851 1979 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC118273.1-201ENST00000525324 3006 ntBASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.27□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU6-304P-201ENST00000364855 107 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC007390.1-201ENST00000415722 356 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 TRGV6-201ENST00000417928 299 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC023128.2-201ENST00000420880 1223 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC012498.1-201ENST00000424037 437 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC092902.1-201ENST00000486999 259 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL21P13-201ENST00000488305 481 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 OR5H3P-201ENST00000502817 919 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC112206.4-201ENST00000515142 405 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 SNORA31.13-201ENST00000516624 135 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC093331.1-201ENST00000521474 169 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 IGHV3-76-201ENST00000522465 295 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC113192.3-201ENST00000529152 742 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTND5P21-201ENST00000531961 522 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC008083.2-201ENST00000546707 476 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC104229.1-201ENST00000561364 255 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AP000919.1-202ENST00000581139 1264 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL365400.2-201ENST00000605604 902 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC011374.2-201ENST00000607135 526 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC068880.4-201ENST00000623082 495 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL035425.3-201ENST00000564206 4996 ntBASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.26□□□□□ -1.89
TMX2-CTNND1H3BSU7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 MFSD8-213ENST00000641134 1327 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU6-225P-201ENST00000384613 103 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 U3.26-201ENST00000391236 204 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 UBA52P6-201ENST00000399822 382 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNA5SP107-201ENST00000411358 122 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 HMGN1P24-201ENST00000412282 298 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTND4P22-201ENST00000413116 1169 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC017079.2-201ENST00000416102 485 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 BOLA3P4-201ENST00000418151 400 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms