Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 MTND5P24-201ENST00000438892 1767 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 RNF6P1-201ENST00000444889 1784 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 ZNF285B-201ENST00000561698 1767 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 RNU5B-4P-201ENST00000363508 111 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 HMGB1P10-201ENST00000395823 563 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC092638.1-201ENST00000411966 1275 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 DEFB130D-201ENST00000426866 237 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC073063.1-201ENST00000434352 607 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC004854.1-201ENST00000440356 349 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC097499.1-201ENST00000444277 208 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 HMGN2P7-201ENST00000456186 273 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 ST13P14-201ENST00000474095 734 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 ACTR3P3-201ENST00000480448 893 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC093278.1-201ENST00000494700 600 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AP001086.1-201ENST00000494882 321 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AL049838.1-201ENST00000563647 981 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC006116.7-201ENST00000590141 756 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC245389.1-201ENST00000605141 529 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AL591516.1-201ENST00000611326 274 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC016597.2-201ENST00000613256 341 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 AC018926.1-201ENST00000616335 435 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 OR4G3P-201ENST00000633500 913 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 U6.107-201ENST00000637108 79 ntBASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRIM49D1C9J1S8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 HMGB3P31-201ENST00000413333 595 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 PRELID3BP11-201ENST00000414230 479 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 USP9YP31-201ENST00000431405 881 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 RPL21P110-201ENST00000433345 446 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 RNU7-27P-201ENST00000459281 62 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC104164.3-201ENST00000467363 1258 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 RPL21P129-201ENST00000491732 478 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 OR5H4P-201ENST00000510851 923 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 RNU1-95P-201ENST00000516357 160 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 RNU1-128P-201ENST00000516704 160 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AL121594.4-201ENST00000556211 1196 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC126365.2-201ENST00000580630 379 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 MIR3158-1-201ENST00000583596 81 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 NF1P5-201ENST00000588287 448 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC097504.2-201ENST00000608088 454 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC012531.5-201ENST00000611375 151 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC006133.1-201ENST00000617106 264 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC039056.2-201ENST00000622261 511 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC116563.2-201ENST00000624751 535 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AL445984.1-201ENST00000637834 659 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 AC009093.8-201ENST00000641769 292 ntBASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49D1C9J1S8 USP8P1-201ENST00000494673 3183 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 RNA5SP124-201ENST00000362739 110 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 RNU6-666P-201ENST00000363499 107 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 SNORD65C-201ENST00000390962 71 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 RPL21P3-201ENST00000395517 478 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms