Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL022322.2-201ENST00000624072 20397 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 GNG5P1-201ENST00000255500 204 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RNU6-845P-201ENST00000362578 103 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RNU6-1322P-201ENST00000364309 107 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 GLULP6-201ENST00000399502 913 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RN7SKP293-201ENST00000411389 296 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 OR4F13P-201ENST00000428478 931 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC133104.1-201ENST00000429100 218 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RPL36P19-201ENST00000430744 301 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC009238.2-201ENST00000431026 355 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 OR52B5P-201ENST00000435337 951 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LSM1P1-201ENST00000438629 273 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 CBX1P1-201ENST00000440184 427 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 MRPL48P1-201ENST00000445390 636 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 MTCO1P27-201ENST00000448269 226 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 NIPA2P5-201ENST00000452282 464 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 MTCO1P42-201ENST00000457379 726 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC023141.9-201ENST00000458734 412 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 NIP7P2-201ENST00000485801 544 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RN7SL447P-201ENST00000494711 245 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC006390.1-201ENST00000508068 283 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC104057.1-201ENST00000515547 497 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AP000790.1-201ENST00000528891 737 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 CYCSP28-201ENST00000534284 321 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL157394.1-201ENST00000562983 1224 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC107954.1-201ENST00000565906 727 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 SNORD95-201ENST00000579879 68 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 HMGN1P30-201ENST00000589286 268 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 CKS1BP3-201ENST00000600888 237 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 LLPHP1-201ENST00000603571 367 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL589674.2-201ENST00000604304 337 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AL136363.1-201ENST00000605349 337 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC002550.2-201ENST00000621246 394 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC009268.2-201ENST00000621925 457 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 MIR4496-201ENST00000635896 61 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 AC073869.10-201ENST00000642016 354 ntBASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CGB1A6NKQ9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 AC025031.4-201ENST00000621248 3271 ntBASIC4.11□□□□□ -1.75
CGB1A6NKQ9 FRG1BP-201ENST00000278882 761 ntBASIC4.11□□□□□ -1.75
CGB1A6NKQ9 FRG1CP-201ENST00000358464 769 ntBASIC4.11□□□□□ -1.75
CGB1A6NKQ9 RNA5SP183-201ENST00000362452 119 ntBASIC4.11□□□□□ -1.75
CGB1A6NKQ9 RNY3P3-201ENST00000363816 102 ntBASIC4.11□□□□□ -1.75
CGB1A6NKQ9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CGB1A6NKQ9 MIR649-201ENST00000384843 97 ntBASIC4.11□□□□□ -1.75
CGB1A6NKQ9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms