Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR2682-201ENST00000580305 110 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AP000919.1-202ENST00000581139 1264 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC016542.1-201ENST00000608259 493 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC004825.2-201ENST00000616634 455 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 RNU6-156P-201ENST00000621869 107 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 MTCO1P14-201ENST00000441695 1559 ntBASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMIM28A0A1B0GU29 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AL136520.1-201ENST00000600311 1322 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 RNU6-1339P-201ENST00000363574 91 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 SNORA48.2-201ENST00000390926 124 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AP002784.2-201ENST00000397300 549 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AL035405.1-201ENST00000400795 710 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 DEFB130D-201ENST00000426866 237 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC000041.1-201ENST00000439655 175 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC104689.1-201ENST00000473356 768 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 RPS4XP6-201ENST00000477670 797 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC015724.1-201ENST00000478577 156 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 RPS3AP43-201ENST00000479743 781 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 OR5H4P-201ENST00000510851 923 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC112206.4-201ENST00000515142 405 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 GTF2IP8-201ENST00000560687 584 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC023824.3-201ENST00000569003 562 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 BNIP3P4-201ENST00000604946 565 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC005000.2-201ENST00000605468 310 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC005014.3-201ENST00000605985 190 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC018926.3-201ENST00000618841 406 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC092608.3-201ENST00000625017 386 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC106858.1-201ENST00000637497 429 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 ZNF849P-201ENST00000594711 1566 ntBASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
SMIM28A0A1B0GU29 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 XIAPP3-201ENST00000312918 795 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 MIR124-3-201ENST00000384866 87 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 MIR23A-201ENST00000385245 73 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 SNORA11C-201ENST00000408532 129 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AL024507.1-201ENST00000412741 274 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 PRELID3BP11-201ENST00000414230 479 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC008280.1-201ENST00000418851 412 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 RPS12P23-201ENST00000419579 400 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC127537.2-201ENST00000439258 465 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 MTND1P33-201ENST00000446251 917 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AL929288.2-201ENST00000446368 407 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC005002.1-201ENST00000447458 540 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 RN7SL863P-201ENST00000462370 296 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC012170.1-201ENST00000495139 359 ntBASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.48□□□□□ -1.85
SMIM28A0A1B0GU29 AC068339.2-201ENST00000534395 618 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms