Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 RPL23AP24-201ENST00000458203 385 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 SCARNA10-201ENST00000459255 330 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 OR9M1P-201ENST00000459641 921 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC109327.1-201ENST00000471666 403 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC090013.1-201ENST00000485147 480 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 RPL7P38-201ENST00000488396 739 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 RN7SKP244-201ENST00000516513 307 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 RNU6-506P-201ENST00000516553 94 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 MTND4LP18-201ENST00000526864 291 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 MED28P5-201ENST00000528254 438 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AP002453.2-201ENST00000533503 320 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 EEF1B2P4-201ENST00000551398 348 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 ZNF519P2-201ENST00000557032 169 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AP005205.1-201ENST00000563503 508 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 TPRKBP2-201ENST00000565969 475 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC023575.1-201ENST00000580510 358 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 MIR548AB-201ENST00000584917 84 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 NF1P5-201ENST00000588287 448 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 HMGB2P1-201ENST00000591146 634 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC090948.1-201ENST00000607464 549 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC090970.3-201ENST00000612566 866 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 OR2L1P-202ENST00000641567 1023 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AL136964.1-201ENST00000622038 2990 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AL391684.1-202ENST00000641293 1636 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC016716.1-201ENST00000265882 708 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 UBBP2-201ENST00000376781 231 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RNU6-1279P-201ENST00000383917 103 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RNU6-317P-201ENST00000384031 107 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AL080315.1-201ENST00000406055 466 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RN7SKP56-201ENST00000410513 331 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RPL21P32-201ENST00000419877 477 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AL356387.2-201ENST00000422272 243 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 CHIAP3-201ENST00000423668 1133 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 EIF4HP2-201ENST00000424380 563 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 MTND1P2-201ENST00000430604 821 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AL365184.2-201ENST00000431139 435 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC092809.1-201ENST00000441469 474 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC004924.1-201ENST00000480160 781 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RPL7L1P13-201ENST00000511702 739 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 MTCYBP43-201ENST00000513621 740 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RNY4P37-201ENST00000516225 96 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RNU6-885P-201ENST00000516607 104 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 ATP5J2P6-201ENST00000565203 266 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC138915.2-201ENST00000569776 97 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 MIR4528-201ENST00000577763 90 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC012409.3-201ENST00000611343 981 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 AC092650.2-201ENST00000619984 902 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 MKKS-204ENST00000639674 192 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 CDR1-202ENST00000625883 1485 ntBASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTDP1Q9Y5B0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 CR848007.1-201ENST00000442354 1699 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms