Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 BOLA3P3-201ENST00000505182 232 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC005921.1-201ENST00000510589 286 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 MTCO1P49-201ENST00000523429 802 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 MED28P5-201ENST00000528254 438 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AP000790.1-201ENST00000528891 737 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC092747.2-201ENST00000545069 983 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 CYCSP30-201ENST00000546447 172 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 LSM6P2-201ENST00000552208 177 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC093519.1-201ENST00000566109 298 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC005412.1-201ENST00000580812 1049 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 BRDTP1-201ENST00000605735 677 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 SNORA62.6-201ENST00000606322 83 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AL513477.2-201ENST00000607858 568 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC034229.5-201ENST00000624258 185 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AP003485.1-201ENST00000625093 753 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC026634.1-201ENST00000634369 198 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.59□□□□□ -1.84
ATG4BQ9Y4P1 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.84
ATG4BQ9Y4P1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
ATG4BQ9Y4P1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 HMGB1P5-201ENST00000255320 642 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 MIR423-201ENST00000362201 94 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 SNORA31-201ENST00000362607 130 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 MIR217-201ENST00000384817 110 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 MIR554-201ENST00000384874 96 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 RHEBP3-201ENST00000411920 351 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 RRM2P4-201ENST00000441721 562 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 MRPL42P4-201ENST00000453267 443 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 TRBV26-201ENST00000456572 344 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 snoU13.3-201ENST00000459441 104 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 snoU109.3-201ENST00000459477 145 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC079203.1-201ENST00000487972 404 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC004069.2-201ENST00000505438 1114 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC005798.1-201ENST00000513715 387 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 MTCO1P30-201ENST00000515244 580 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 RNA5SP164-201ENST00000516533 110 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 RNU6-885P-201ENST00000516607 104 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AP004242.1-201ENST00000533701 349 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 MIR1254-2-201ENST00000579553 63 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 MIR5708-201ENST00000579723 85 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC107982.3-201ENST00000584957 985 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AC113368.1-201ENST00000603736 382 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AP003973.1-201ENST00000604639 691 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AL356863.1-201ENST00000623378 1080 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 AL157700.1-201ENST00000561973 1432 ntBASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4BQ9Y4P1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 OR4A15-201ENST00000314706 1035 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RNU6-582P-201ENST00000362989 107 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RNU5E-10P-201ENST00000363506 118 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RNA5SP189-201ENST00000364920 115 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms