Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AL110115.1-201ENST00000614396 364 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC022149.2-201ENST00000621061 203 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 MFSD8-236ENST00000641509 4050 ntBASIC3.13□□□□□ -1.91
RHBDD3Q9Y3P4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 RNA5SP258-201ENST00000362750 119 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-263P-201ENST00000363811 107 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 RNU4-78P-201ENST00000410940 126 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 PAICSP7-201ENST00000419829 962 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 RPL21P32-201ENST00000419877 477 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC245054.1-201ENST00000420944 258 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC233981.1-201ENST00000423224 461 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 SNRPEP4-201ENST00000435815 279 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC026402.1-201ENST00000513642 170 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC092593.2-201ENST00000513866 913 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 RN7SKP60-201ENST00000516985 239 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC007991.1-201ENST00000522680 631 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC011602.1-201ENST00000546484 331 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC074051.3-201ENST00000570238 358 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC006077.1-201ENST00000604746 343 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC016877.3-201ENST00000606778 504 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC096586.1-201ENST00000610267 561 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AC105227.2-201ENST00000615075 605 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AL590240.3-201ENST00000621416 943 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 AL732618.1-201ENST00000623251 301 ntBASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDD3Q9Y3P4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 MIR30E-201ENST00000362104 92 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 RN7SKP280-201ENST00000364196 304 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 RNVU1-3-201ENST00000364313 161 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 U8.11-201ENST00000384699 133 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 U8.12-201ENST00000384701 133 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AL356057.1-202ENST00000402263 756 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 U3.39-201ENST00000408569 239 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC017079.2-201ENST00000416102 485 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC233728.2-201ENST00000425348 757 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 PTP4A1P3-201ENST00000433661 420 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC092170.1-201ENST00000440211 356 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 RPS4XP2-201ENST00000458402 793 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 U8.18-201ENST00000459285 133 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC010301.1-201ENST00000473936 355 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC021205.2-201ENST00000480069 347 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 MTCO3P44-201ENST00000510977 541 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms