Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC011352.3-201ENST00000505162 593 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC010285.3-201ENST00000511668 676 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC008494.2-201ENST00000514544 370 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC093853.1-201ENST00000515689 483 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 SNORD116-26-201ENST00000516006 96 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 RNU6-885P-201ENST00000516607 104 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 RNU6-232P-201ENST00000517144 64 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC105185.1-201ENST00000518705 535 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 MTCO1P49-201ENST00000523429 802 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 SMARCE1P4-201ENST00000523647 241 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 OR4A12P-201ENST00000530847 918 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 MIR5685-201ENST00000579080 79 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AP006248.2-201ENST00000623309 592 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AC116563.2-201ENST00000624751 535 ntBASIC4.15□□□□□ -1.75
SIX4Q9UIU6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SIX4Q9UIU6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 RNU5D-1-201ENST00000363299 116 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 Y_RNA.318-201ENST00000365131 97 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MIR134-201ENST00000385258 73 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC234782.4-201ENST00000417646 1048 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 RPL36AP36-201ENST00000418616 301 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 UBE2D3P4-201ENST00000441973 436 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MTND2P4-201ENST00000445034 1004 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MTCYBP3-201ENST00000445588 1137 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 RPS27AP8-201ENST00000452665 445 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 BZW1P2-201ENST00000473537 826 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MTND6P6-201ENST00000478031 263 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LINC00888-204ENST00000487386 421 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AL139099.1-201ENST00000497398 403 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC146944.2-203ENST00000502493 354 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 PRELID3BP7-201ENST00000503606 469 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC111000.2-201ENST00000507775 550 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 OR5BM1P-201ENST00000512021 366 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC026726.1-201ENST00000512859 601 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC139495.1-202ENST00000513164 354 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 RNU6-1225P-201ENST00000516336 65 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 CYCSP30-201ENST00000546447 172 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 GTF2IP8-201ENST00000560687 584 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC090616.2-202ENST00000584248 222 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC107982.3-201ENST00000584957 985 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC093227.2-201ENST00000589357 285 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 VN1R90P-201ENST00000595717 726 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AL451086.1-201ENST00000605596 223 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC243654.2-201ENST00000612843 443 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AL354976.1-201ENST00000613843 387 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC069209.1-201ENST00000619282 651 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC079684.1-201ENST00000621405 437 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AC087190.4-201ENST00000574616 8334 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
SIX4Q9UIU6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX4Q9UIU6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms