Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 MTCYBP27-201ENST00000555160 670 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 SULT1C2P1-202ENST00000562418 459 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 RN7SL703P-201ENST00000578485 302 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC022916.3-201ENST00000592961 742 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC005776.1-201ENST00000603164 290 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC128687.1-201ENST00000605304 619 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 FP236240.3-201ENST00000623061 327 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 CR381670.1-201ENST00000624291 1693 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AP004289.2-201ENST00000444413 1457 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AC138915.3-201ENST00000562908 1389 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RNU6-50P-201ENST00000362356 103 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RNA5SP258-201ENST00000362750 119 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RNU6-839P-201ENST00000363347 108 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RNU6-629P-201ENST00000384061 103 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 TAF13P2-201ENST00000416876 286 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RPL7P2-201ENST00000427639 268 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 HIGD1AP12-201ENST00000427832 281 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AL365396.1-201ENST00000430854 671 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 NEK4P1-201ENST00000433383 879 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 SKP1P1-201ENST00000438081 489 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RNA5SP208-201ENST00000516156 78 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RN7SKP83-201ENST00000516512 178 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RNU6-352P-201ENST00000516908 107 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 OR4R2P-201ENST00000530815 597 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 SNORD84-203ENST00000584275 78 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AP001542.2-201ENST00000593141 364 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 VN1R85P-201ENST00000601587 426 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AC005344.1-201ENST00000613391 459 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 AC079684.1-201ENST00000621405 437 ntBASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHRNA9Q9UGM1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 RNA5SP235-201ENST00000365411 114 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC234772.1-201ENST00000377927 937 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 MIR30B-201ENST00000384850 88 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 RPS29P7-201ENST00000439662 171 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AL662791.1-201ENST00000441992 928 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC006480.1-201ENST00000449887 378 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 RPL23AP55-201ENST00000498163 452 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 SNORA31.20-201ENST00000517111 133 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC018630.1-201ENST00000541376 925 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC099489.2-201ENST00000574976 260 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 VN1R87P-201ENST00000596706 487 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 GAS5-AS1-201ENST00000602767 694 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC025588.3-201ENST00000604182 274 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AL159169.3-201ENST00000608871 561 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC099676.1-201ENST00000608886 657 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 AC024941.1-201ENST00000612250 334 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms