Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC005726.1-201ENST00000494679 427 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 RN7SKP66-201ENST00000516681 231 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AC025678.1-201ENST00000567861 338 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 LARP7P2-201ENST00000575306 125 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AL356055.1-201ENST00000602528 446 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 RPL23AP92-201ENST00000603609 255 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AL049634.3-201ENST00000604968 457 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 HSPE1P14-201ENST00000605812 302 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AL020991.1-201ENST00000612314 373 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AC104260.1-201ENST00000616660 539 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AC073869.10-201ENST00000642016 354 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AC063976.2-201ENST00000425667 3556 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 CASC19-280ENST00000642102 1351 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 AL049780.3-201ENST00000624612 1583 ntBASIC5.24□□□□□ -1.57
PPARGC1AQ9UBK2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 RNU6-780P-201ENST00000391030 104 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 RN7SKP247-201ENST00000411094 308 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AL589872.1-201ENST00000426602 288 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 ISCA1P6-201ENST00000427740 390 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 MTCO2P11-201ENST00000431069 680 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 RPL38P1-201ENST00000460914 211 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AC091180.1-201ENST00000462104 372 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 COX6B1P5-201ENST00000509843 249 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AC004980.4-201ENST00000513375 203 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 MIR4716-201ENST00000579628 84 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 BNIP3P9-201ENST00000603714 553 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AC013244.1-201ENST00000604279 193 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AL353621.2-201ENST00000605340 133 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AP006248.2-201ENST00000623309 592 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 AP002799.1-201ENST00000623552 423 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 MTND4P12-201ENST00000498999 1377 ntBASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PPARGC1AQ9UBK2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 ERCC6-202ENST00000374127 1782 ntBASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 Y_RNA.46-201ENST00000362695 102 ntBASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 RNU6-730P-201ENST00000383954 104 ntBASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 RN7SKP16-201ENST00000410180 299 ntBASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 HMGB3P20-201ENST00000417997 600 ntBASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 BX323845.1-201ENST00000432417 179 ntBASIC5.22□□□□□ -1.57
PPARGC1AQ9UBK2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms